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Protein

Uncharacterized protein YqcC

Gene

yqcC

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Biological processi

  • single-species biofilm formation Source: EcoCyc

Enzyme and pathway databases

BioCyciEcoCyc:G7450-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YqcC
Gene namesi
Name:yqcC
Ordered Locus Names:b2792, JW2763
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13172 yqcC

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001693261 – 109Uncharacterized protein YqcCAdd BLAST109

Proteomic databases

PaxDbiQ46919
PRIDEiQ46919

Interactioni

Protein-protein interaction databases

BioGridi4262249, 17 interactors
IntActiQ46919, 1 interactor
STRINGi316385.ECDH10B_2960

Structurei

Secondary structure

1109
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi3 – 20Combined sources18
Helixi31 – 33Combined sources3
Turni34 – 36Combined sources3
Turni42 – 44Combined sources3
Helixi48 – 51Combined sources4
Turni52 – 54Combined sources3
Helixi55 – 64Combined sources10
Helixi76 – 82Combined sources7
Helixi90 – 104Combined sources15

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2HGKNMR-A1-109[»]
ProteinModelPortaliQ46919
SMRiQ46919
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ46919

Family & Domainsi

Sequence similaritiesi

To the N-terminal of E.carotovora exoenzyme regulation regulon ORF1. The C-terminal part is colinear with YqcB.Curated
To H.influenzae HI_1436.Curated

Phylogenomic databases

eggNOGiENOG4105WP7 Bacteria
COG3098 LUCA
HOGENOMiHOG000273810
InParanoidiQ46919
OMAiQPFCMDT

Family and domain databases

Gene3Di1.20.1440.40, 1 hit
InterProiView protein in InterPro
IPR007384 UCP006257
IPR023376 YqcC-like_dom
IPR036814 YqcC-like_sf
PANTHERiPTHR39586 PTHR39586, 1 hit
PfamiView protein in Pfam
PF04287 DUF446, 1 hit
PIRSFiPIRSF006257 UCP006257, 1 hit
SUPFAMiSSF158452 SSF158452, 1 hit

Sequencei

Sequence statusi: Complete.

Q46919-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTTHDRVRLQ LQALEALLRE HQHWRNDEPQ PHQFNSTQPF FMDTMEPLEW
60 70 80 90 100
LQWVLIPRMH DLLDNKQPLP GAFAVAPYYE MALATDHPQR ALILAELEKL

DALFADDAS
Length:109
Mass (Da):12,787
Last modified:November 1, 1996 - v1
Checksum:i3B2FA6B05E08BBE7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U29581 Genomic DNA Translation: AAB40442.1
U00096 Genomic DNA Translation: AAC75834.1
AP009048 Genomic DNA Translation: BAE76864.1
PIRiD65061
RefSeqiNP_417272.1, NC_000913.3
WP_000206990.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC75834; AAC75834; b2792
BAE76864; BAE76864; BAE76864
GeneIDi946027
KEGGiecj:JW2763
eco:b2792
PATRICifig|511145.12.peg.2892

Similar proteinsi

Entry informationi

Entry nameiYQCC_ECOLI
AccessioniPrimary (citable) accession number: Q46919
Secondary accession number(s): Q2MA42
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: November 1, 1996
Last modified: March 28, 2018
This is version 109 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
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