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Protein

Uncharacterized FAD-linked oxidoreductase YgcU

Gene

ygcU

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionOxidoreductase
LigandFAD, Flavoprotein

Enzyme and pathway databases

BioCyciEcoCyc:G7439-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized FAD-linked oxidoreductase YgcU (EC:1.-.-.-)
Gene namesi
Name:ygcU
Synonyms:ygcT, ygcV
Ordered Locus Names:b4463, JW5442
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13128 ygcU

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001281831 – 484Uncharacterized FAD-linked oxidoreductase YgcUAdd BLAST484

Proteomic databases

PaxDbiQ46911
PRIDEiQ46911

Interactioni

Protein-protein interaction databases

BioGridi4260744, 32 interactors
DIPiDIP-12136N
STRINGi316385.ECDH10B_2940

Structurei

3D structure databases

ProteinModelPortaliQ46911
SMRiQ46911
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini47 – 226FAD-binding PCMH-typePROSITE-ProRule annotationAdd BLAST180

Sequence similaritiesi

Phylogenomic databases

eggNOGiENOG4107R3A Bacteria
COG0277 LUCA
HOGENOMiHOG000230996
InParanoidiQ46911
OMAiAFPNFEQ
PhylomeDBiQ46911

Family and domain databases

Gene3Di3.30.43.10, 1 hit
InterProiView protein in InterPro
IPR016166 FAD-bd_2
IPR036318 FAD-bd_2-like_sf
IPR016167 FAD-bd_2_sub1
IPR016164 FAD-linked_Oxase-like_C
IPR004113 FAD-linked_oxidase_C
IPR006094 Oxid_FAD_bind_N
PfamiView protein in Pfam
PF02913 FAD-oxidase_C, 1 hit
PF01565 FAD_binding_4, 1 hit
SUPFAMiSSF55103 SSF55103, 1 hit
SSF56176 SSF56176, 1 hit
PROSITEiView protein in PROSITE
PS51387 FAD_PCMH, 1 hit

Sequencei

Sequence statusi: Complete.

Q46911-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSLSRAAIVD QLKEIVGADR VITDETVLKK NSIDRFRKFP DIHGIYTLPI
60 70 80 90 100
PAAVVKLGST EQVSRVLNFM NAHKINGVPR TGASATEGGL ETVVENSVVL
110 120 130 140 150
DGSAMNQIIN IDIENMQATA QCGVPLEVLE NALREKGYTT GHSPQSKPLA
160 170 180 190 200
QMGGLVATRS IGQFSTLYGA IEDMVVGLEA VLADGTVTRI KNVPRRAAGP
210 220 230 240 250
DIRHIIIGNE GALCYITEVT VKIFKFTPEN NLFYGYILED MKTGFNILRE
260 270 280 290 300
IMVEGYRPSI ARLYDAEDGT QHFTHFADGK CVLIFMAEGN PRIAKVTGEG
310 320 330 340 350
IAEIVARYPQ CQRVDSKLIE TWFNNLNWGP DKVAAERVQI LKTGNMGFTT
360 370 380 390 400
EVSGCWSCIH EIYESVINRI RTEFPHADDI TMLGGHSSHS YQNGTNMYFV
410 420 430 440 450
YDYNVVDCKP EEEIDKYHNP LNKIICEETI RLGGSMVHHH GIGKHRVHWS
460 470 480
KLEHGSAWAL LEGLKKQFDP NGIMNTGTIY PIEK
Length:484
Mass (Da):53,737
Last modified:October 11, 2004 - v4
Checksum:i6DC18635146103D1
GO

Sequence cautioni

The sequence AAA69282 differs from that shown. Reason: Frameshift at positions 90 and 208.Curated
The sequence AAA69283 differs from that shown. Reason: Frameshift at positions 90 and 208.Curated
The sequence AAA69284 differs from that shown. Reason: Frameshift at positions 90 and 208.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U29579 Genomic DNA Translation: AAA69284.1 Frameshift.
U29579 Genomic DNA Translation: AAA69283.1 Frameshift.
U29579 Genomic DNA Translation: AAA69282.1 Frameshift.
U00096 Genomic DNA Translation: AAT48151.1
AP009048 Genomic DNA Translation: BAE76849.1
RefSeqiWP_000059307.1, NZ_LN832404.1
YP_026183.1, NC_000913.3

Genome annotation databases

EnsemblBacteriaiAAT48151; AAT48151; b4463
BAE76849; BAE76849; BAE76849
GeneIDi2847709
KEGGiecj:JW5442
eco:b4463
PATRICifig|1411691.4.peg.3965

Similar proteinsi

Entry informationi

Entry nameiYGCU_ECOLI
AccessioniPrimary (citable) accession number: Q46911
Secondary accession number(s): Q2MA57
, Q46910, Q46912, Q6BF63
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: October 11, 2004
Last modified: March 28, 2018
This is version 116 of the entry and version 4 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health