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Protein

Probable electron transfer flavoprotein-quinone oxidoreductase YgcN

Gene

ygcN

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Probably accepts electrons from YgcQ/YgcR and reduces a quinone.

Cofactori

FADCurated

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi7 – 21FADSequence analysisAdd BLAST15

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Oxidoreductase

Keywords - Ligandi

FAD, Flavoprotein

Enzyme and pathway databases

BioCyciEcoCyc:G7432-MONOMER.
ECOL316407:JW2736-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable electron transfer flavoprotein-quinone oxidoreductase YgcN (EC:1.5.5.-)
Gene namesi
Name:ygcN
Ordered Locus Names:b2766, JW2736
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13121. ygcN.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002006971 – 423Probable electron transfer flavoprotein-quinone oxidoreductase YgcNAdd BLAST423

Proteomic databases

PaxDbiQ46904.
PRIDEiQ46904.

Interactioni

Protein-protein interaction databases

BioGridi4262289. 15 interactors.
IntActiQ46904. 3 interactors.
STRINGi511145.b2766.

Structurei

3D structure databases

ProteinModelPortaliQ46904.
SMRiQ46904.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ETF-QO/FixC family.Curated

Phylogenomic databases

eggNOGiENOG4105DWH. Bacteria.
COG0644. LUCA.
HOGENOMiHOG000018936.
InParanoidiQ46904.
KOiK00313.
OMAiRTLIKNT.
PhylomeDBiQ46904.

Family and domain databases

Gene3Di3.50.50.60. 1 hit.
InterProiIPR023753. FAD/NAD-binding_dom.
[Graphical view]
PfamiPF12831. FAD_oxidored. 1 hit.
[Graphical view]
SUPFAMiSSF51905. SSF51905. 2 hits.

Sequencei

Sequence statusi: Complete.

Q46904-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEDDCDIIII GAGIAGTACA LRCARAGLSV LLLERAEIPG SKNLSGGRLY
60 70 80 90 100
THALAELLPQ FHLTAPLERR ITHESLSLLT PDGVTTFSSL QPGGESWSVL
110 120 130 140 150
RARFDPWLVA EAEKEGVECI PGATVDALYE ENGRVCGVIC GDDILRARYV
160 170 180 190 200
VLAEGANSVL AERHGLVTRP AGEAMALGIK EVLSLETSAI EERFHLENNE
210 220 230 240 250
GAALLFSGRI CDDLPGGAFL YTNQQTLSLG IVCPLSSLTQ SRVPASELLT
260 270 280 290 300
RFKAHPAVRP LIKNTESLEY GAHLVPEGGL HSMPVQYAGN GWLLVGDALR
310 320 330 340 350
SCVNTGISVR GMDMALTGAQ AAAQTLISAC QHREPQNLFP LYHHNVERSL
360 370 380 390 400
LWDVLQRYQH VPALLQRPGW YRTWPALMQD ISRDLWDQGD KPVPPLRQLF
410 420
WHHLRRHGLW HLAGDVIRSL RCL
Length:423
Mass (Da):46,393
Last modified:October 18, 2001 - v2
Checksum:i346ED1A132F31DFC
GO

Sequence cautioni

The sequence AAA69276 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U29579 Genomic DNA. Translation: AAA69276.1. Different initiation.
U00096 Genomic DNA. Translation: AAC75808.2.
AP009048 Genomic DNA. Translation: BAE76843.1.
PIRiB65058.
RefSeqiNP_417246.4. NC_000913.3.
WP_001301334.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC75808; AAC75808; b2766.
BAE76843; BAE76843; BAE76843.
GeneIDi946114.
KEGGiecj:JW2736.
eco:b2766.
PATRICi32120944. VBIEscCol129921_2864.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U29579 Genomic DNA. Translation: AAA69276.1. Different initiation.
U00096 Genomic DNA. Translation: AAC75808.2.
AP009048 Genomic DNA. Translation: BAE76843.1.
PIRiB65058.
RefSeqiNP_417246.4. NC_000913.3.
WP_001301334.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliQ46904.
SMRiQ46904.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4262289. 15 interactors.
IntActiQ46904. 3 interactors.
STRINGi511145.b2766.

Proteomic databases

PaxDbiQ46904.
PRIDEiQ46904.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC75808; AAC75808; b2766.
BAE76843; BAE76843; BAE76843.
GeneIDi946114.
KEGGiecj:JW2736.
eco:b2766.
PATRICi32120944. VBIEscCol129921_2864.

Organism-specific databases

EchoBASEiEB2922.
EcoGeneiEG13121. ygcN.

Phylogenomic databases

eggNOGiENOG4105DWH. Bacteria.
COG0644. LUCA.
HOGENOMiHOG000018936.
InParanoidiQ46904.
KOiK00313.
OMAiRTLIKNT.
PhylomeDBiQ46904.

Enzyme and pathway databases

BioCyciEcoCyc:G7432-MONOMER.
ECOL316407:JW2736-MONOMER.

Miscellaneous databases

PROiQ46904.

Family and domain databases

Gene3Di3.50.50.60. 1 hit.
InterProiIPR023753. FAD/NAD-binding_dom.
[Graphical view]
PfamiPF12831. FAD_oxidored. 1 hit.
[Graphical view]
SUPFAMiSSF51905. SSF51905. 2 hits.
ProtoNetiSearch...

Entry informationi

Entry nameiYGCN_ECOLI
AccessioniPrimary (citable) accession number: Q46904
Secondary accession number(s): Q2MA63
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: October 18, 2001
Last modified: November 2, 2016
This is version 117 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.