Q46898 (YGCI_ECOLI) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Uncharacterized protein ygcI

Gene names

Name:	ygcI
Ordered Locus Names:	b2757, JW5844

Organism

Escherichia coli (strain K12)

Taxonomic identifier

83333 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia

Protein attributes

Sequence length	224 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

General annotation (Comments)

Sequence caution

The sequence AAA69267.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.

Ontologies

Keywords
Domain	Signal
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 17	17	Potential
	Chain	18 – 224	207	Uncharacterized protein ygcI		PRO_0000013896

Sequences

	Sequence		Length	Mass (Da)
	Q46898 [UniParc]. Last modified December 1, 2000. Version 2. Checksum: 1C42CC009B317D68	FASTA	224	25,209
	10 20 30 40 50 60 MRSYLILRLA GPMQAWGQPT FEGTRPTGRF PTRSGLLGLL GACLGIQRDD TSSLQALSES 70 80 90 100 110 120 VQFAVRCDEL ILDDRRVSVT GLRDYHTVLG AREDYRGLKS HETIQTWREY LCDASFTVAL 130 140 150 160 170 180 WLTPHATMVI SELEKAVLKP RYTPYLGRRS CPLTHPLFLG TCQASDPQKA LLNYEPVGGD 190 200 210 220 IYSEESVTGH HLKFTARDEP MITLPRQFAS REWYVIKGGM DVSQ

References

[1]

"The complete genome sequence of Escherichia coli K-12." Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y. Science 277:1453-1474(1997) [PubMed: 9278503] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / MG1655 / ATCC 47076.

[2]

"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110." Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T. Mol. Syst. Biol. 2:E1-E5(2006) [PubMed: 16738553] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Cross-references

Sequence databases
EMBL GenBank DDBJ	U29579 Genomic DNA. Translation: AAA69267.1. Different initiation. U00096 Genomic DNA. Translation: AAC75799.2. AP009048 Genomic DNA. Translation: BAE76834.1.
PIR	A65057.
RefSeq	NP_417237.2. NC_000913.2.
3D structure databases
ProteinModelPortal	Q46898.
ModBase	Search...
Protein-protein interaction databases
DIP	DIP-12125N.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBESCT00000001756; EBESCP00000001756; EBESCG00000001446. EBESCT00000015639; EBESCP00000014930; EBESCG00000014699.
GeneID	947225.
GenomeReviews	Gene locus JW5844 in contig AP009048_GR. Gene locus b2757 in contig U00096_GR.
KEGG	ecj:JW5844. eco:b2757.
PATRIC	32120924. VBIEscCol129921_2854.
Organism-specific databases
EchoBASE	EB2917.
EcoGene	EG13116. ygcI.
Phylogenomic databases
eggNOG	NOG47480.
GeneTree	EBGT00050000011189.
HOGENOM	HBG469837.
OMA	AFNRHYQ.
ProtClustDB	CLSK924503.
Enzyme and pathway databases
BioCyc	EcoCyc:G7427-MONOMER. MetaCyc:G7427-MONOMER.
Gene expression databases
Genevestigator	Q46898.
Family and domain databases
InterPro	IPR021124. CRISPR-assoc_prot_Cas5. IPR013422. CRISPR-assoc_prot_Cas5_N. IPR010147. CRISPR-assoc_prot_Cas5e-typ. [Graphical view]
Pfam	PF09704. Cas_Cas5d. 1 hit. [Graphical view]
TIGRFAMs	TIGR01868. CasD_Cas5e. 1 hit. TIGR02593. CRISPR_cas5. 1 hit.
ProtoNet	Search...

Entry information

Entry name

YGCI_ECOLI

Accession

Primary (citable) accession number: Q46898
Secondary accession number(s): Q2MA72

Entry history

Integrated into UniProtKB/Swiss-Prot:	December 1, 2000
Last sequence update:	December 1, 2000
Last modified:	January 25, 2012
This is version 68 of the entry and version 2 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program