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Protein

Probable transcriptional regulator YgiV

Gene

ygiV

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Protein predictedi

Functioni

Represses expression of mcbR.1 Publication

GO - Biological processi

  • negative regulation of transcription, DNA-templated Source: EcoCyc
  • transcription, DNA-templated Source: UniProtKB-KW

Keywordsi

Molecular functionRepressor
Biological processTranscription, Transcription regulation

Enzyme and pathway databases

BioCyciEcoCyc:G7573-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Probable transcriptional regulator YgiV
Gene namesi
Name:ygiV
Ordered Locus Names:b3023, JW5502
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13024 ygiV

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002013331 – 160Probable transcriptional regulator YgiVAdd BLAST160

Proteomic databases

PaxDbiQ46866
PRIDEiQ46866

Interactioni

Protein-protein interaction databases

BioGridi4259248, 65 interactors
STRINGi316385.ECDH10B_3197

Structurei

3D structure databases

ProteinModelPortaliQ46866
SMRiQ46866
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4105F4I Bacteria
COG3449 LUCA
HOGENOMiHOG000125024
InParanoidiQ46866
KOiK07471
OMAiRTHATFN

Family and domain databases

Gene3Di3.20.80.10, 1 hit
InterProiView protein in InterPro
IPR010499 AraC_E-bd
IPR029442 GyrI-like
IPR011256 Reg_factor_effector_dom_sf
PfamiView protein in Pfam
PF06445 GyrI-like, 1 hit
SMARTiView protein in SMART
SM00871 AraC_E_bind, 1 hit
SUPFAMiSSF55136 SSF55136, 1 hit

Sequencei

Sequence statusi: Complete.

Q46866-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTNLTLDVNI IDFPSIPVAM LPHRCSPELL NYSVAKFIMW RKETGLSPVN
60 70 80 90 100
QSQTFGVAWD DPATTAPEAF RFDICGSVSE PIPDNRYGVS NGELTGGRYA
110 120 130 140 150
VARHVGELDD ISHTVWGIIR HWLPASGEKM RKAPILFHYT NLAEGVTEQR
160
LETDVYVPLA
Length:160
Mass (Da):17,827
Last modified:October 11, 2004 - v2
Checksum:iEEF5A02CBF2DCCF4
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti104 – 105HV → QL in AAA69191 (PubMed:9278503).Curated2

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U28377 Genomic DNA Translation: AAA69191.1
U00096 Genomic DNA Translation: AAT48162.1
AP009048 Genomic DNA Translation: BAE77079.1
PIRiE65089
RefSeqiWP_000183505.1, NZ_LN832404.1
YP_026197.1, NC_000913.3

Genome annotation databases

EnsemblBacteriaiAAT48162; AAT48162; b3023
BAE77079; BAE77079; BAE77079
GeneIDi945805
KEGGiecj:JW5502
eco:b3023
PATRICifig|1411691.4.peg.3707

Similar proteinsi

Entry informationi

Entry nameiYGIV_ECOLI
AccessioniPrimary (citable) accession number: Q46866
Secondary accession number(s): Q2M9H7, Q6BF52
Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 27, 2002
Last sequence update: October 11, 2004
Last modified: March 28, 2018
This is version 113 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health