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Protein

Inner membrane protein YghQ

Gene

yghQ

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G7549-MONOMER.
ECOL316407:JW5490-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Inner membrane protein YghQ
Gene namesi
Name:yghQ
Ordered Locus Names:b2983, JW5490
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13001. yghQ.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini1 – 3737PeriplasmicSequence analysisAdd
BLAST
Transmembranei38 – 5821HelicalSequence analysisAdd
BLAST
Topological domaini59 – 10042CytoplasmicSequence analysisAdd
BLAST
Transmembranei101 – 12121HelicalSequence analysisAdd
BLAST
Topological domaini122 – 13413PeriplasmicSequence analysisAdd
BLAST
Transmembranei135 – 15521HelicalSequence analysisAdd
BLAST
Topological domaini156 – 17722CytoplasmicSequence analysisAdd
BLAST
Transmembranei178 – 19821HelicalSequence analysisAdd
BLAST
Topological domaini199 – 26163PeriplasmicSequence analysisAdd
BLAST
Transmembranei262 – 28221HelicalSequence analysisAdd
BLAST
Topological domaini283 – 32341CytoplasmicSequence analysisAdd
BLAST
Transmembranei324 – 34421HelicalSequence analysisAdd
BLAST
Topological domaini345 – 35511PeriplasmicSequence analysisAdd
BLAST

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc
Complete GO annotation...

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 355355Inner membrane protein YghQPRO_0000169389Add
BLAST

Proteomic databases

PaxDbiQ46841.

Interactioni

Protein-protein interaction databases

BioGridi4262371. 7 interactions.
DIPiDIP-12208N.
IntActiQ46841. 1 interaction.
MINTiMINT-1235911.
STRINGi511145.b2983.

Structurei

3D structure databases

ProteinModelPortaliQ46841.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4108S55. Bacteria.
COG2244. LUCA.
HOGENOMiHOG000124958.
OMAiLLYMAGQ.

Family and domain databases

InterProiIPR002797. Polysacc_synth.
[Graphical view]
PfamiPF01943. Polysacc_synt. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q46841-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAGFNIKHWF ADGAFRTIIR NSAWLGSSNV VSALLGLLAL SCAGKGMTPA
60 70 80 90 100
MFGVLVIVQS YAKSISDFIK FQTWQLVVQY GTPALTNNNP QQFRNVVSFS
110 120 130 140 150
FSLDIVSGAV AIVGGIALLP FLSHSLGLDD QSFWLAALYC TLIPSMASST
160 170 180 190 200
PTGILRAVDR FDLIAVQQAT KPFLRAAGSV VAWYFDFGFA GFVIAWYVSN
210 220 230 240 250
LVGGTMYWWF AARELRRRNI HNAFKLNLFE SARYIKGAWS FVWSTNIAHS
260 270 280 290 300
IWSARNSCST VLVGIVLGPA AAGLFKIAMT FFDAAGTPAG LLGKSFYPEV
310 320 330 340 350
MRLDPRTTRP WLLGVKSGLL AGGIGILVAL AVLIVGKPLI SLVFGVKYLE

AYDLI
Length:355
Mass (Da):38,533
Last modified:July 11, 2001 - v2
Checksum:i47A6482C8C398D1D
GO

Sequence cautioni

The sequence AAA69150 differs from that shown. Reason: Erroneous initiation. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U28377 Genomic DNA. Translation: AAA69150.1. Different initiation.
U00096 Genomic DNA. Translation: AAT48159.1.
AP009048 Genomic DNA. Translation: BAE77044.1.
RefSeqiWP_000896895.1. NZ_CP014272.1.
YP_026192.1. NC_000913.3.

Genome annotation databases

EnsemblBacteriaiAAT48159; AAT48159; b2983.
BAE77044; BAE77044; BAE77044.
GeneIDi947716.
KEGGiecj:JW5490.
eco:b2983.
PATRICi32121382. VBIEscCol129921_3078.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U28377 Genomic DNA. Translation: AAA69150.1. Different initiation.
U00096 Genomic DNA. Translation: AAT48159.1.
AP009048 Genomic DNA. Translation: BAE77044.1.
RefSeqiWP_000896895.1. NZ_CP014272.1.
YP_026192.1. NC_000913.3.

3D structure databases

ProteinModelPortaliQ46841.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4262371. 7 interactions.
DIPiDIP-12208N.
IntActiQ46841. 1 interaction.
MINTiMINT-1235911.
STRINGi511145.b2983.

Proteomic databases

PaxDbiQ46841.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAT48159; AAT48159; b2983.
BAE77044; BAE77044; BAE77044.
GeneIDi947716.
KEGGiecj:JW5490.
eco:b2983.
PATRICi32121382. VBIEscCol129921_3078.

Organism-specific databases

EchoBASEiEB2823.
EcoGeneiEG13001. yghQ.

Phylogenomic databases

eggNOGiENOG4108S55. Bacteria.
COG2244. LUCA.
HOGENOMiHOG000124958.
OMAiLLYMAGQ.

Enzyme and pathway databases

BioCyciEcoCyc:G7549-MONOMER.
ECOL316407:JW5490-MONOMER.

Miscellaneous databases

PROiQ46841.

Family and domain databases

InterProiIPR002797. Polysacc_synth.
[Graphical view]
PfamiPF01943. Polysacc_synt. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYGHQ_ECOLI
AccessioniPrimary (citable) accession number: Q46841
Secondary accession number(s): Q2M9L2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: July 11, 2001
Last modified: September 7, 2016
This is version 104 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.