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Protein

Putative uncharacterized protein YghO

Gene

yghO

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein uncertaini

Functioni

GO - Molecular functioni

  • DNA binding Source: EcoCyc

GO - Biological processi

  • regulation of transcription, DNA-templated Source: EcoCyc
  • single-species biofilm formation Source: EcoCyc
  • transcription, DNA-templated Source: EcoCyc
Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:G7547-MONOMER.
ECOL316407:JW5848-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative uncharacterized protein YghO
Gene namesi
Name:yghO
Ordered Locus Names:b2981, JW5848
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12999. yghO.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001693881 – 390Putative uncharacterized protein YghOAdd BLAST390

Interactioni

Protein-protein interaction databases

BioGridi4263151. 4 interactors.
DIPiDIP-12207N.
IntActiQ46840. 1 interactor.
STRINGi316407.85675789.

Structurei

3D structure databases

ProteinModelPortaliQ46840.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000014460.
InParanoidiQ46840.
OMAiAWEKNWG.
PhylomeDBiQ46840.

Family and domain databases

Gene3Di3.40.630.30. 1 hit.
InterProiIPR016181. Acyl_CoA_acyltransferase.
[Graphical view]
SUPFAMiSSF55729. SSF55729. 2 hits.

Sequencei

Sequence statusi: Complete.

Q46840-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMNPVLWLQM TNMISYQGLV RTFLNKNDLK AFIAFPSSLY PDDPNWIPPL
60 70 80 90 100
FIERNEHLSA KNPGTDHIIW QAWVAKKAGQ IVGRITAQID TLHRERYGKD
110 120 130 140 150
TGHFGMIDAI DDPQVFAALF GAAEAWLKSQ GASKISGPFS LNINQESGLL
160 170 180 190 200
IEGFDTPPCA MMPHGKPWYA AHIEQLGYHK GIDLLAWWMQ RTDLTFSPAL
210 220 230 240 250
KKLMDQVRKK VTIRCINRQR FAEEMQILRE IFNSGWQHNW GFVPFTEHEF
260 270 280 290 300
ATMGDQLKYL VPDDMIYIAE IDSAPCAFIV GLPNINEAIA DLNGSLFPFG
310 320 330 340 350
WAKLLWRLKV SGVRTARVPL MGVRDEYQFS RIGPVIALLL IEALRDPFAR
360 370 380 390
RKIDALEMSW ILETNTGMNN MLERIGAEPY KRYRLYEKQI
Length:390
Mass (Da):44,674
Last modified:November 30, 2016 - v3
Checksum:i3417FFEBE168C57D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U28377 Genomic DNA. Translation: AAA69148.1.
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. Translation: BAE77042.1.
PIRiC65084.

Genome annotation databases

EnsemblBacteriaiBAE77042; BAE77042; BAE77042.
KEGGiecj:JW5848.
PATRICi48665407. VBIEscCol107702_3012.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U28377 Genomic DNA. Translation: AAA69148.1.
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. Translation: BAE77042.1.
PIRiC65084.

3D structure databases

ProteinModelPortaliQ46840.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4263151. 4 interactors.
DIPiDIP-12207N.
IntActiQ46840. 1 interactor.
STRINGi316407.85675789.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAE77042; BAE77042; BAE77042.
KEGGiecj:JW5848.
PATRICi48665407. VBIEscCol107702_3012.

Organism-specific databases

EchoBASEiEB2822.
EcoGeneiEG12999. yghO.

Phylogenomic databases

HOGENOMiHOG000014460.
InParanoidiQ46840.
OMAiAWEKNWG.
PhylomeDBiQ46840.

Enzyme and pathway databases

BioCyciEcoCyc:G7547-MONOMER.
ECOL316407:JW5848-MONOMER.

Family and domain databases

Gene3Di3.40.630.30. 1 hit.
InterProiIPR016181. Acyl_CoA_acyltransferase.
[Graphical view]
SUPFAMiSSF55729. SSF55729. 2 hits.
ProtoNetiSearch...

Entry informationi

Entry nameiYGHO_ECOLI
AccessioniPrimary (citable) accession number: Q46840
Secondary accession number(s): Q2M9L4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 1, 2001
Last sequence update: November 30, 2016
Last modified: November 30, 2016
This is version 107 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Caution

Could be the product of a pseudogene. The original protein is truncated by the IS5LO element which inserted near the N-terminus.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.