Q46840 (YGHO_ECOLI) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Putative uncharacterized protein YghO

Gene names

Name:	yghO
Ordered Locus Names:	b2981, JW5848

Organism

Escherichia coli (strain K12) [Reference proteome] [HAMAP]

Taxonomic identifier

83333 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia › Escherichia coli

Protein attributes

Sequence length	366 AA.
Sequence status	Fragment.
Protein existence	Uncertain

General annotation (Comments)

Caution	Could be the product of a pseudogene. The original protein is truncated by the IS5LO element which is inserted right before residue 1. What was the original N-terminal of this protein is not known.
Sequence caution	The sequence AAA69148.1 differs from that shown. Reason: Erroneous initiation. The sequence BAE77042.1 differs from that shown. Reason: Erroneous initiation.

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	biofilm formation Inferred from mutant phenotype PubMed 14731270. Source: EcoCyc regulation of transcription, DNA-dependent Inferred from mutant phenotype PubMed 14731270. Source: EcoCyc transcription, DNA-dependent Inferred from mutant phenotype PubMed 14731270. Source: EcoCyc
Molecular_function	DNA binding Inferred from mutant phenotype PubMed 14731270. Source: EcoCyc
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	‹1 – 366	›366	Putative uncharacterized protein YghO		PRO_0000169388
Experimental info
	Non-terminal residue	1	1

Sequences

	Sequence		Length	Mass (Da)
	Q46840 [UniParc]. Last modified June 1, 2001. Version 2. Checksum: BB7AB349A49DB83A	FASTA	366	41,804
	10 20 30 40 50 60 NKNDLKAFIA FPSSLYPDDP NWIPPLFIER NEHLSAKNPG TDHIIWQAWV AKKAGQIVGR 70 80 90 100 110 120 ITAQIDTLHR ERYGKDTGHF GMIDAIDDPQ VFAALFGAAE AWLKSQGASK ISGPFSLNIN 130 140 150 160 170 180 QESGLLIEGF DTPPCAMMPH GKPWYAAHIE QLGYHKGIDL LAWWMQRTDL TFSPALKKLM 190 200 210 220 230 240 DQVRKKVTIR CINRQRFAEE MQILREIFNS GWQHNWGFVP FTEHEFATMG DQLKYLVPDD 250 260 270 280 290 300 MIYIAEIDSA PCAFIVGLPN INEAIADLNG SLFPFGWAKL LWRLKVSGVR TARVPLMGVR 310 320 330 340 350 360 DEYQFSRIGP VIALLLIEAL RDPFARRKID ALEMSWILET NTGMNNMLER IGAEPYKRYR LYEKQI

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The complete genome sequence of Escherichia coli K-12." Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y. Science 277:1453-1474(1997) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / MG1655 / ATCC 47076.
[2]	"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110." Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T. Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
[3]	Rudd K.E. Unpublished observations (JAN-1999) Cited for: CONCEPTUAL TRANSLATION.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	U28377 Genomic DNA. Translation: AAA69148.1. Different initiation. U00096 Genomic DNA. No translation available. AP009048 Genomic DNA. Translation: BAE77042.1. Different initiation.
PIR	C65084.
RefSeq	YP_491178.1. NC_007779.1.
3D structure databases
ProteinModelPortal	Q46840.
ModBase	Search...
Protein-protein interaction databases
DIP	DIP-12207N.
IntAct	Q46840. 1 interaction.
STRING	316407.yghO.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAE77042; BAE77042; BAE77042.
GeneID	12934157.
KEGG	ecj:Y75_p2910.
PATRIC	48665407. VBIEscCol107702_3012.
Organism-specific databases
EchoBASE	EB2822.
EcoGene	EG12999. yghO.
Phylogenomic databases
eggNOG	NOG10641.
HOGENOM	HOG000014460.
OMA	FFGFFEC.
Enzyme and pathway databases
BioCyc	EcoCyc:G7547-MONOMER. ECOL316407:JW5848-MONOMER.
Gene expression databases
Genevestigator	Q46840.
Family and domain databases
Gene3D	3.40.630.30. 1 hit.
InterPro	IPR016181. Acyl_CoA_acyltransferase. [Graphical view]
SUPFAM	SSF55729. Acyl_CoA_acyltransferase. 1 hit.
ProtoNet	Search...

Entry information

Entry name

YGHO_ECOLI

Accession

Primary (citable) accession number: Q46840
Secondary accession number(s): Q2M9L4

Entry history

Integrated into UniProtKB/Swiss-Prot:	June 1, 2001
Last sequence update:	June 1, 2001
Last modified:	May 1, 2013
This is version 90 of the entry and version 2 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program