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Protein

Uncharacterized lipoprotein YghG

Gene

yghG

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

  • cellular response to DNA damage stimulus Source: EcoliWiki
Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:G7538-MONOMER.
ECOL316407:JW2938-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized lipoprotein YghG
Gene namesi
Name:yghG
Ordered Locus Names:b2971, JW2938
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12991. yghG.

Subcellular locationi

  • Cell membrane PROSITE-ProRule annotation; Lipid-anchor PROSITE-ProRule annotation

GO - Cellular componenti

  • cell outer membrane Source: EcoCyc
  • plasma membrane Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2424PROSITE-ProRule annotationAdd
BLAST
Chaini25 – 136112Uncharacterized lipoprotein YghGPRO_0000013898Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Lipidationi25 – 251N-palmitoyl cysteinePROSITE-ProRule annotation
Lipidationi25 – 251S-diacylglycerol cysteinePROSITE-ProRule annotation

Keywords - PTMi

Lipoprotein, Palmitate

Proteomic databases

PaxDbiQ46835.
PRIDEiQ46835.

Interactioni

Protein-protein interaction databases

BioGridi4262363. 11 interactions.
STRINGi511145.b2971.

Structurei

3D structure databases

ProteinModelPortaliQ46835.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG410765S. Bacteria.
ENOG410Z3FE. LUCA.
HOGENOMiHOG000124903.
OMAiHQANKIN.
OrthoDBiEOG6N3CVR.

Family and domain databases

InterProiIPR016502. T2SSS_2.
[Graphical view]
PfamiPF16549. T2SSS_2. 1 hit.
[Graphical view]
PIRSFiPIRSF007010. UCP007010. 1 hit.
PROSITEiPS51257. PROKAR_LIPOPROTEIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q46835-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSIKQMPGRV LISLLLSVTG LLSGCASHNE NASLLAKKQA QNISQNLPIK
60 70 80 90 100
SAGYTLVLAQ SSGTTVKMTI ISEAGTQTTQ TPDAFLTSYQ RQMCADPTVK
110 120 130
LMITEGINYS ITINDTRTGN QYQRKLDRTT CGIVKA
Length:136
Mass (Da):14,670
Last modified:November 1, 1996 - v1
Checksum:i8CF586EC327D869A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U28377 Genomic DNA. Translation: AAA69138.1.
U00096 Genomic DNA. Translation: AAC76007.1.
AP009048 Genomic DNA. Translation: BAE77032.1.
PIRiA65083.
RefSeqiNP_417445.1. NC_000913.3.
WP_001324279.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC76007; AAC76007; b2971.
BAE77032; BAE77032; BAE77032.
GeneIDi947470.
KEGGiecj:JW2938.
eco:b2971.
PATRICi32121358. VBIEscCol129921_3066.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U28377 Genomic DNA. Translation: AAA69138.1.
U00096 Genomic DNA. Translation: AAC76007.1.
AP009048 Genomic DNA. Translation: BAE77032.1.
PIRiA65083.
RefSeqiNP_417445.1. NC_000913.3.
WP_001324279.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliQ46835.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4262363. 11 interactions.
STRINGi511145.b2971.

Proteomic databases

PaxDbiQ46835.
PRIDEiQ46835.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC76007; AAC76007; b2971.
BAE77032; BAE77032; BAE77032.
GeneIDi947470.
KEGGiecj:JW2938.
eco:b2971.
PATRICi32121358. VBIEscCol129921_3066.

Organism-specific databases

EchoBASEiEB2815.
EcoGeneiEG12991. yghG.

Phylogenomic databases

eggNOGiENOG410765S. Bacteria.
ENOG410Z3FE. LUCA.
HOGENOMiHOG000124903.
OMAiHQANKIN.
OrthoDBiEOG6N3CVR.

Enzyme and pathway databases

BioCyciEcoCyc:G7538-MONOMER.
ECOL316407:JW2938-MONOMER.

Miscellaneous databases

PROiQ46835.

Family and domain databases

InterProiIPR016502. T2SSS_2.
[Graphical view]
PfamiPF16549. T2SSS_2. 1 hit.
[Graphical view]
PIRSFiPIRSF007010. UCP007010. 1 hit.
PROSITEiPS51257. PROKAR_LIPOPROTEIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYGHG_ECOLI
AccessioniPrimary (citable) accession number: Q46835
Secondary accession number(s): Q2M9M4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: November 1, 1996
Last modified: January 20, 2016
This is version 98 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.