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Protein

Putative type II secretion system C-type protein YghF

Gene

yghF

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Protein uncertaini

Functioni

Might be involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.Curated

Caution

Could be the product of a pseudogene.Curated

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processProtein transport, Transport

Enzyme and pathway databases

BioCyciEcoCyc:G7537-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Putative type II secretion system C-type protein YghF
Alternative name(s):
Putative general secretion pathway C-type protein YghF
Gene namesi
Name:yghF
Ordered Locus Names:b2970, JW5484
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12990 yghF

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Periplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 24Sequence analysisAdd BLAST24
ChainiPRO_000001309625 – 288Putative type II secretion system C-type protein YghFAdd BLAST264

Interactioni

Protein-protein interaction databases

BioGridi4261896, 12 interactors
DIPiDIP-12204N
IntActiQ46834, 1 interactor
STRINGi316385.ECDH10B_3143

Structurei

3D structure databases

ProteinModelPortaliQ46834
SMRiQ46834
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the GSP C family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4108XKW Bacteria
COG3031 LUCA
HOGENOMiHOG000124892
InParanoidiQ46834
KOiK02452
OMAiWRIIPEP

Family and domain databases

InterProiView protein in InterPro
IPR036034 PDZ_sf
IPR001639 T2SS_protein-C
IPR024961 T2SSC_N
PfamiView protein in Pfam
PF11356 T2SSC, 1 hit
SUPFAMiSSF50156 SSF50156, 1 hit
TIGRFAMsiTIGR01713 typeII_sec_gspC, 1 hit
PROSITEiView protein in PROSITE
PS01141 T2SP_C, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q46834-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFWLMLLIIS AKMAHSLWRY ISFSAEYTAV SQPVNKPSRV DAKTFDKNDV
60 70 80 90 100
QLISQQNWFG KYQPVAAQVK QPEPVPVAET RLNVVLRGIA FGARPGAVIE
110 120 130 140 150
EGGKQQVYLQ GETLGSHNAV IEEINRDHVM LRYQGKIERL SLAEEERSTV
160 170 180 190 200
AVTNKKAVSD EAKQAVAEPA VSVPVEIPAA VRQALAKDPQ KIFNYIQLTP
210 220 230 240 250
VRKEGIVGYA AKPGADRSLF DASGFKEGDI AIALNQQDFT DPRAMIALMR
260 270 280
QLPSMDSIQL TVLRKGARHD ISIALRYRLF CPPYWKKS
Length:288
Mass (Da):32,120
Last modified:November 1, 1996 - v1
Checksum:iF1750A8BEB4DC6AF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U28377 Genomic DNA Translation: AAA69137.1
U00096 Genomic DNA No translation available.
AP009048 Genomic DNA Translation: BAE77031.1
PIRiH65082

Genome annotation databases

EnsemblBacteriaiBAE77031; BAE77031; BAE77031
KEGGiecj:JW5484

Similar proteinsi

Entry informationi

Entry nameiYGHF_ECOLI
AccessioniPrimary (citable) accession number: Q46834
Secondary accession number(s): Q2M9M5
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 15, 1998
Last sequence update: November 1, 1996
Last modified: March 28, 2018
This is version 115 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health