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Protein

Putative type II secretion system L-type protein YghE

Gene

yghE

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein uncertaini

Functioni

Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (Potentail).

GO - Molecular functioni

Complete GO annotation...

Keywords - Biological processi

Protein transport, Transport

Enzyme and pathway databases

BioCyciEcoCyc:G7536-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative type II secretion system L-type protein YghE
Alternative name(s):
Putative general secretion pathway L-type protein YghE
Gene namesi
Name:yghE
Ordered Locus Names:b2969
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12989. yghE.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei136 – 156HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002073211 – 286Putative type II secretion system L-type protein YghEAdd BLAST286

Proteomic databases

PRIDEiQ46833.

Interactioni

Protein-protein interaction databases

DIPiDIP-12203N.
IntActiQ46833. 1 interactor.
MINTiMINT-1231396.

Structurei

3D structure databases

ProteinModelPortaliQ46833.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the GSP L family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

HOGENOMiHOG000124870.
OMAiICHIDEC.

Family and domain databases

InterProiIPR025691. GspL_pp_dom.
IPR007812. T2SS_protein-L.
[Graphical view]
PfamiPF12693. GspL_C. 1 hit.
[Graphical view]
TIGRFAMsiTIGR01709. typeII_sec_gspL. 1 hit.

Sequencei

Sequence statusi: Complete.

Q46833-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIHQQHMRNI AQWLQENGIT RATVAPDWMS IPCGFMACDA QRVICRIDEC
60 70 80 90 100
RGWSAGLALA PVMFRAQLNE QDLPLSLTVV GIAPEKLSAW AGADAERLTV
110 120 130 140 150
TALPAITTYG EPEGNLLTGP WQPRVSYRKQ WARWRVMILP ILLILVALAV
160 170 180 190 200
ERGVTLWSVS EQVAQSRTQA EEQFLTLFPE QKRIVNLRSQ VTMALKKYRP
210 220 230 240 250
QADDTRLLAE LSAIASTLKS ASLSDIEMRG FTFDQKRQIL HLQLRAANFA
260 270 280
SFDKLRSVLA TDYVVQQDAL QKEGDAVSGG VTLRRK
Length:286
Mass (Da):32,058
Last modified:November 1, 1996 - v1
Checksum:i15305711D0597FCA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U28377 Genomic DNA. Translation: AAA69136.1.
U00096 Genomic DNA. No translation available.
PIRiG65082.
RefSeqiWP_001393563.1. NZ_LN832404.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U28377 Genomic DNA. Translation: AAA69136.1.
U00096 Genomic DNA. No translation available.
PIRiG65082.
RefSeqiWP_001393563.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliQ46833.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-12203N.
IntActiQ46833. 1 interactor.
MINTiMINT-1231396.

Proteomic databases

PRIDEiQ46833.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

EchoBASEiEB2813.
EcoGeneiEG12989. yghE.

Phylogenomic databases

HOGENOMiHOG000124870.
OMAiICHIDEC.

Enzyme and pathway databases

BioCyciEcoCyc:G7536-MONOMER.

Family and domain databases

InterProiIPR025691. GspL_pp_dom.
IPR007812. T2SS_protein-L.
[Graphical view]
PfamiPF12693. GspL_C. 1 hit.
[Graphical view]
TIGRFAMsiTIGR01709. typeII_sec_gspL. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiYGHE_ECOLI
AccessioniPrimary (citable) accession number: Q46833
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: November 1, 1996
Last modified: November 2, 2016
This is version 94 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Caution

Could be the product of a pseudogene.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.