Q46798 (YGER_ECOLI) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Uncharacterized lipoprotein YgeR

Gene names

Name:	ygeR
Ordered Locus Names:	b2865, JW2833

Organism

Escherichia coli (strain K12) [Reference proteome] [HAMAP]

Taxonomic identifier

83333 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia › Escherichia coli

Protein attributes

Sequence length	251 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

General annotation (Comments)

Subcellular location	Cell membrane; Lipid-anchor Potential.
Sequence caution	The sequence AAA83046.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.

Ontologies

Keywords
Cellular component	Cell membrane Membrane
Domain	Signal
PTM	Lipoprotein Palmitate
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	autolysis Inferred from genetic interaction PubMed 19525345. Source: EcoliWiki cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro cytokinetic cell separation Inferred from genetic interaction PubMed 19525345. Source: EcoliWiki
Cellular_component	plasma membrane Inferred from electronic annotation. Source: UniProtKB-SubCell
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 25	25	Potential
	Chain	26 – 251	226	Uncharacterized lipoprotein YgeR		PRO_0000013776
Amino acid modifications
	Lipidation	26	1	N-palmitoyl cysteine Potential
	Lipidation	26	1	S-diacylglycerol cysteine Potential

Sequences

	Sequence		Length	Mass (Da)
	Q46798 [UniParc]. Last modified March 27, 2002. Version 2. Checksum: FCD6235D39790475	FASTA	251	26,565
	10 20 30 40 50 60 MSAGRLNKKS LGIVMLLSVG LLLAGCSGSK SSDTGTYSGS VYTVKRGDTL YRISRTTGTS 70 80 90 100 110 120 VKELARLNGI SPPYTIEVGQ KLKLGGAKSS SITRKSTAKS TTKTASVTPS SAVPKSSWPP 130 140 150 160 170 180 VGQRCWLWPT TGKVIMPYST ADGGNKGIDI SAPRGTPIYA AGAGKVVYVG NQLRGYGNLI 190 200 210 220 230 240 MIKHSEDYIT AYAHNDTMLV NNGQSVKAGQ KIATMGSTDA ASVRLHFQIR YRATAIDPLR 250 YLPPQGSKPK C

References

[1]	"The complete genome sequence of Escherichia coli K-12." Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y. Science 277:1453-1474(1997) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / MG1655 / ATCC 47076.
[2]	"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110." Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T. Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	U28375 Genomic DNA. Translation: AAA83046.1. Different initiation. U00096 Genomic DNA. Translation: AAC75903.2. AP009048 Genomic DNA. Translation: BAE76931.1.
PIR	A65070.
RefSeq	NP_417341.4. NC_000913.2. YP_491067.1. NC_007779.1.
3D structure databases
ProteinModelPortal	Q46798.
SMR	Q46798. Positions 129-240.
ModBase	Search...
Protein-protein interaction databases
DIP	DIP-36034N.
IntAct	Q46798. 5 interactions.
STRING	511145.b2865.
Proteomic databases
PaxDb	Q46798.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAC75903; AAC75903; b2865. BAE76931; BAE76931; BAE76931.
GeneID	12933324. 947352.
KEGG	ecj:Y75_p2798. eco:b2865.
PATRIC	32121140. VBIEscCol129921_2958.
Organism-specific databases
EchoBASE	EB2860.
EcoGene	EG13048. ygeR.
Phylogenomic databases
eggNOG	COG0739.
HOGENOM	HOG000159026.
KO	K12943.
OMA	NISPPYT.
ProtClustDB	CLSK894399.
Enzyme and pathway databases
BioCyc	EcoCyc:G7484-MONOMER. ECOL316407:JW2833-MONOMER.
Gene expression databases
Genevestigator	Q46798.
Family and domain databases
InterPro	IPR011055. Dup_hybrid_motif. IPR016047. Peptidase_M23. IPR018392. Peptidoglycan-bd_lysin. IPR002482. Peptidoglycan-bd_Lysin_subgr. [Graphical view]
Pfam	PF01476. LysM. 1 hit. PF01551. Peptidase_M23. 1 hit. [Graphical view]
SMART	SM00257. LysM. 1 hit. [Graphical view]
SUPFAM	SSF51261. Dup_hybrid_motif. 1 hit.
PROSITE	PS51257. PROKAR_LIPOPROTEIN. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

YGER_ECOLI

Accession

Primary (citable) accession number: Q46798
Secondary accession number(s): Q2M9X5

Entry history

Integrated into UniProtKB/Swiss-Prot:	March 27, 2002
Last sequence update:	March 27, 2002
Last modified:	May 1, 2013
This is version 97 of the entry and version 2 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program