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Protein

Putative uncharacterized protein YgeO

Gene

ygeO

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein uncertaini

Functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:G7479-MONOMER.
ECOL316407:JW5846-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative uncharacterized protein YgeO
Gene namesi
Name:ygeO
Ordered Locus Names:b2859, JW5846
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13045. ygeO.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 132132Putative uncharacterized protein YgeOPRO_0000271885Add
BLAST

Interactioni

Protein-protein interaction databases

BioGridi4262313. 550 interactions.
STRINGi316407.85675673.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000054883.
OMAiANPINNW.

Family and domain databases

InterProiIPR013388. T3SS_OrgA/MxiK.
[Graphical view]
PfamiPF09482. OrgA_MxiK. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02555. OrgA_MxiK. 1 hit.

Sequencei

Sequence statusi: Fragment.

Q46795-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
INNWNLLPLI CLLSGCHFYR ERFAERGFFY KVPDVLRDYL SAIPLEINEK
60 70 80 90 100
ARYKPGIANY HNIITCGFST LLPYIRQQPL AMQQRFNLLF PDFVDHIQSP
110 120 130
LPLASTLLER ITFYAKKNRD ELDKISCKWC CD
Length:132
Mass (Da):15,561
Last modified:January 9, 2007 - v2
Checksum:iB72D10C90F816B27
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U28375 Genomic DNA. Translation: AAA83041.1. Sequence problems.
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. Translation: BAE76926.1. Sequence problems.
PIRiD65069.

Genome annotation databases

EnsemblBacteriaiBAE76926; BAE76926; BAE76926.
KEGGiecj:JW5846.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U28375 Genomic DNA. Translation: AAA83041.1. Sequence problems.
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. Translation: BAE76926.1. Sequence problems.
PIRiD65069.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4262313. 550 interactions.
STRINGi316407.85675673.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAE76926; BAE76926; BAE76926.
KEGGiecj:JW5846.

Organism-specific databases

EcoGeneiEG13045. ygeO.

Phylogenomic databases

HOGENOMiHOG000054883.
OMAiANPINNW.

Enzyme and pathway databases

BioCyciEcoCyc:G7479-MONOMER.
ECOL316407:JW5846-MONOMER.

Family and domain databases

InterProiIPR013388. T3SS_OrgA/MxiK.
[Graphical view]
PfamiPF09482. OrgA_MxiK. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02555. OrgA_MxiK. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYGEO_ECOLI
AccessioniPrimary (citable) accession number: Q46795
Secondary accession number(s): Q2M9Y0, Q7DFU8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 9, 2007
Last sequence update: January 9, 2007
Last modified: April 13, 2016
This is version 92 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Caution

Could be the product of a pseudogene. The original protein is truncated by the IS2H element which is inserted right before residue 1. What was the original N-terminal of this protein is not known.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.