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Protein

Putative uncharacterized protein YgeN

Gene

ygeN

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein uncertaini

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G7477-MONOMER.
EcoCyc:G7478-MONOMER.
ECOL316407:JW5459-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative uncharacterized protein YgeN
Gene namesi
Name:ygeN
Synonyms:ygeM
Ordered Locus Names:b2858, JW5459/JW5460
ORF Names:b2857
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13044. ygeN.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002522831 – 235Putative uncharacterized protein YgeNAdd BLAST235

Proteomic databases

PRIDEiQ46793.

Interactioni

Protein-protein interaction databases

BioGridi4259234. 10 interactors.
IntActiQ46793. 9 interactors.
STRINGi316407.85675672.

Structurei

3D structure databases

ProteinModelPortaliQ46793.
SMRiQ46793.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000081459.
OMAiNEICEHA.

Sequencei

Sequence statusi: Complete.

Q46793-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRKKIEMSLI KSPANGVVIK RKISDGLKEI VSLKEKILLE TTAKIQSIEE
60 70 80 90 100
KREEKFIQGY YDGYTKGIID EMDNFIPLIS LLCSELEKKR INMINDLKSI
110 120 130 140 150
LLKPSEEVDV FIKIFESWVT KLPSISGPVN LHIPTSFKDK SLEVESYFVD
160 170 180 190 200
KSIWNVHITF HDDKRFVFFT DQFIAEFSPQ EFVDNCEQYL INNHCFSPDK
210 220 230
VNEICEQARH YLVEKMFETH SLDMNNSVLA SPEDL
Length:235
Mass (Da):27,365
Last modified:January 9, 2007 - v3
Checksum:iD6F0EC35E9686555
GO

Sequence cautioni

The sequence AAA83039 differs from that shown. Reason: Frameshift at position 87.Curated
The sequence AAA83040 differs from that shown. Reason: Frameshift at position 87.Curated
The sequence BAE76925 differs from that shown. Reason: Frameshift at position 87.Curated
The sequence U00096 differs from that shown. Reason: Frameshift at position 87.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U28375 Genomic DNA. Translation: AAA83039.1. Frameshift.
U28375 Genomic DNA. Translation: AAA83040.1. Frameshift.
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. Translation: BAE76925.1. Frameshift.
PIRiB65069.
C65069.
RefSeqiWP_001350544.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiBAE76925; BAE76925; BAE76925.
KEGGiecj:JW5459.
PATRICi48665154. VBIEscCol107702_2890.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U28375 Genomic DNA. Translation: AAA83039.1. Frameshift.
U28375 Genomic DNA. Translation: AAA83040.1. Frameshift.
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. Translation: BAE76925.1. Frameshift.
PIRiB65069.
C65069.
RefSeqiWP_001350544.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliQ46793.
SMRiQ46793.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4259234. 10 interactors.
IntActiQ46793. 9 interactors.
STRINGi316407.85675672.

Proteomic databases

PRIDEiQ46793.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAE76925; BAE76925; BAE76925.
KEGGiecj:JW5459.
PATRICi48665154. VBIEscCol107702_2890.

Organism-specific databases

EcoGeneiEG13044. ygeN.

Phylogenomic databases

HOGENOMiHOG000081459.
OMAiNEICEHA.

Enzyme and pathway databases

BioCyciEcoCyc:G7477-MONOMER.
EcoCyc:G7478-MONOMER.
ECOL316407:JW5459-MONOMER.

Family and domain databases

ProtoNetiSearch...

Entry informationi

Entry nameiYGEN_ECOLI
AccessioniPrimary (citable) accession number: Q46793
Secondary accession number(s): P76640
, Q2M9Y1, Q46794, Q7DFU9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 3, 2006
Last sequence update: January 9, 2007
Last modified: November 2, 2016
This is version 89 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Caution

Could be the product of a pseudogene. A frameshift in position 87 produces two separate ORFs.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.