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Protein

Putative uncharacterized protein YgeF

Gene

ygeF

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein uncertaini

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G7470-MONOMER.
ECOL316407:JW2818-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative uncharacterized protein YgeF
Gene namesi
Name:ygeF
Ordered Locus Names:b2850, JW2818
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13036. ygeF.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 148148Putative uncharacterized protein YgeFPRO_0000169339Add
BLAST

Proteomic databases

EPDiQ46786.

Interactioni

Protein-protein interaction databases

BioGridi4262052. 10 interactions.
STRINGi316407.85675666.

Structurei

3D structure databases

ProteinModelPortaliQ46786.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000009774.
OMAiEGKYLTH.

Sequencei

Sequence statusi: Complete.

Q46786-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKPRNINNSL PLQPLVPDQE NKNKKNEEKS VNPVKITMGS GLNYIEQESL
60 70 80 90 100
GGKYLTHDLS IKIADISEEI IQQAILSAMS IYKFSITDDL MSMAVNELIK
110 120 130 140
LTKIENNVDL NKFTTICTDV LSPRVTRHNK EKNKRHSTLL KNPLFNFH
Length:148
Mass (Da):16,878
Last modified:November 1, 1996 - v1
Checksum:i59D6F53C973614DF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U28375 Genomic DNA. Translation: AAA83032.1.
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. Translation: BAE76919.1.
PIRiC65068.

Genome annotation databases

EnsemblBacteriaiBAE76919; BAE76919; BAE76919.
KEGGiecj:JW2818.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U28375 Genomic DNA. Translation: AAA83032.1.
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. Translation: BAE76919.1.
PIRiC65068.

3D structure databases

ProteinModelPortaliQ46786.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4262052. 10 interactions.
STRINGi316407.85675666.

Proteomic databases

EPDiQ46786.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAE76919; BAE76919; BAE76919.
KEGGiecj:JW2818.

Organism-specific databases

EchoBASEiEB2851.
EcoGeneiEG13036. ygeF.

Phylogenomic databases

HOGENOMiHOG000009774.
OMAiEGKYLTH.

Enzyme and pathway databases

BioCyciEcoCyc:G7470-MONOMER.
ECOL316407:JW2818-MONOMER.

Family and domain databases

ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYGEF_ECOLI
AccessioniPrimary (citable) accession number: Q46786
Secondary accession number(s): Q2M9Y7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1996
Last modified: March 16, 2016
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Caution

Could be the product of a pseudogene.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.