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Q46707

- Q46707_ECOLX

UniProt

Q46707 - Q46707_ECOLX

Protein
Submitted name:

Endonuclease

Gene

nuc

Organism
Escherichia coli
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
  1. Functioni

    GO - Molecular functioni

    1. endonuclease activity Source: UniProtKB-KW

    Keywords - Molecular functioni

    EndonucleaseImported, Hydrolase, Nuclease

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    EndonucleaseImported
    Submitted name:
    NucImported
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Name:nucImported
    ORF Names:pKC394-032Imported, pKC396-025Imported, pMUR050_045Imported
    Encoded oniPlasmid pHHA45Imported
    Plasmid pKC394Imported
    Plasmid pKC396Imported
    Plasmid pKM101Imported
    Plasmid pLEW517Imported
    Plasmid pMUR050Imported
    Plasmid pQNR2078Imported
    OrganismiEscherichia coliImported
    Taxonomic identifieri562 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    1BYRX-ray2.00A23-177[»]
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiQ46707.

    Family & Domainsi

    Family and domain databases

    InterProiIPR025202. PLD-like_dom.
    IPR001736. PLipase_D/transphosphatidylase.
    [Graphical view]
    PfamiPF13091. PLDc_2. 1 hit.
    [Graphical view]
    SMARTiSM00155. PLDc. 1 hit.
    [Graphical view]
    PROSITEiPS50035. PLD. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q46707-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKKLATWLLA AAFTTAALPA FAVEPSVQVG YSPEGSARVL VLSAIDSAKT    50
    SIRMMAYSFT APDIMKALVA AKKRGVDVKI VIDERGNTGR ASIAAMNYIA 100
    NSGIPLRTDS NFPIQHDKVI IVDNVTVETG SFNFTKAAET KNSENAVVIW 150
    NMPKLAESFL EHWQDRWNQG RDYRSSY 177
    Length:177
    Mass (Da):19,445
    Last modified:November 1, 1996 - v1
    Checksum:iE0EFD6133C328F3E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U09868 Genomic DNA. Translation: AAA86461.1.
    AY522431 Genomic DNA. Translation: ABG33821.1.
    DQ390454 Genomic DNA. Translation: ABG49201.1.
    HM138652 Genomic DNA. Translation: ADH29990.1.
    HM138653 Genomic DNA. Translation: ADH30040.1.
    JX065630 Genomic DNA. Translation: AFP24965.1.
    HE613857 Genomic DNA. Translation: CCE73956.1.
    PIRiI79276.
    RefSeqiYP_001096362.1. NC_009132.1.
    YP_003717504.1. NC_014231.1.
    YP_006903017.1. NC_019033.1.
    YP_006953730.1. NC_019087.1.
    YP_006954498.1. NC_019098.1.
    YP_724502.1. NC_007682.3.

    Genome annotation databases

    GeneIDi13897318.
    13906676.
    13909226.
    3861224.
    4924687.
    9284748.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U09868 Genomic DNA. Translation: AAA86461.1 .
    AY522431 Genomic DNA. Translation: ABG33821.1 .
    DQ390454 Genomic DNA. Translation: ABG49201.1 .
    HM138652 Genomic DNA. Translation: ADH29990.1 .
    HM138653 Genomic DNA. Translation: ADH30040.1 .
    JX065630 Genomic DNA. Translation: AFP24965.1 .
    HE613857 Genomic DNA. Translation: CCE73956.1 .
    PIRi I79276.
    RefSeqi YP_001096362.1. NC_009132.1.
    YP_003717504.1. NC_014231.1.
    YP_006903017.1. NC_019033.1.
    YP_006953730.1. NC_019087.1.
    YP_006954498.1. NC_019098.1.
    YP_724502.1. NC_007682.3.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    1BYR X-ray 2.00 A 23-177 [» ]
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 13897318.
    13906676.
    13909226.
    3861224.
    4924687.
    9284748.

    Miscellaneous databases

    EvolutionaryTracei Q46707.

    Family and domain databases

    InterProi IPR025202. PLD-like_dom.
    IPR001736. PLipase_D/transphosphatidylase.
    [Graphical view ]
    Pfami PF13091. PLDc_2. 1 hit.
    [Graphical view ]
    SMARTi SM00155. PLDc. 1 hit.
    [Graphical view ]
    PROSITEi PS50035. PLD. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Common ancestry between IncN conjugal transfer genes and macromolecular export systems of plant and animal pathogens."
      Pohlman R.F., Genetti H.D., Winans S.C.
      Mol. Microbiol. 14:655-668(1994) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Plasmid: pKM101
    2. "Entry exclusion of the IncN plasmid pKM101 is mediated by a single hydrophilic protein containing a lipid attachment motif."
      Pohlman R.F., Genetti H.D., Winans S.C.
      Plasmid 31:158-165(1994) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Plasmid: pKM101
    3. "Crystal structure of a phospholipase D family member."
      Stuckey J.A., Dixon J.E.
      Nat. Struct. Biol. 6:278-284(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (2.00 ANGSTROMS) OF 23-177.
    4. "armA and aminoglycoside resistance in Escherichia coli."
      Gonzalez-Zorn B., Teshager T., Casas M., Porrero M.C., Moreno M.A., Courvalin P., Dominguez L.
      Emerg. Infect. Dis. 11:954-956(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Plasmid: pMUR050
    5. Cited for: NUCLEOTIDE SEQUENCE.
      Plasmid: pMUR050
    6. "Facile recovery of individual high-molecular-weight, low-copy-number natural plasmids for genomic sequencing."
      Williams L.E., Detter C., Barry K., Lapidus A., Summers A.O.
      Appl. Environ. Microbiol. 72:4899-4906(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: 517-2H1Imported.
      Plasmid: pLEW517
    7. Gonzalez-Zorn B., Catalan A., Moreno M.A., Dominguez L.
      Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Plasmid: pMUR050
    8. "A novel IS26 structure surrounds blaCTX-M genes in different plasmids from German clinical Escherichia coli isolates."
      Cullik A., Pfeifer Y., Prager R., von Baum H., Witte W.
      J. Med. Microbiol. 59:580-587(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: ST131Imported.
      Plasmid: pKC394 pKC396
    9. Schwarz S.P.
      Submitted (NOV-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: 2078Imported.
      Plasmid: pQNR2078
    10. "Detection of qnr genes among Escherichia coli isolates of animal origin and complete sequence of the conjugative qnrB19-carrying plasmid pQNR2078."
      Schink A.K., Kadlec K., Schwarz S.
      J. Antimicrob. Chemother. 67:1099-1102(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: 2078Imported.
      Plasmid: pQNR2078
    11. "Characterization of IncN plasmids carrying blaCTX-M-1 and qnr genes in Escherichia coli and Salmonella from animals, the environment and humans."
      Dolejska M., Villa L., Hasman H., Hansen L., Carattoli A.
      J. Antimicrob. Chemother. 68:333-339(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: HHA45Imported.
      Plasmid: pHHA45

    Entry informationi

    Entry nameiQ46707_ECOLX
    AccessioniPrimary (citable) accession number: Q46707
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 1, 1996
    Last sequence update: November 1, 1996
    Last modified: October 1, 2014
    This is version 78 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported, PlasmidImported

    External Data

    Dasty 3