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Q46707 (Q46707_ECOLX) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 77. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Nuc EMBL AFP24965.1

Uncharacterized protein EMBL ABG49201.1
Gene names
Name:nuc EMBL AAA86461.1
ORF Names:pKC394-032 EMBL ADH29990.1, pKC396-025 EMBL ADH30040.1, pMUR050_045 EMBL ABG33821.1
Encoded onPlasmid pHHA45 Ref.11 EMBL AFP24965.1
Plasmid pKC394 Ref.8 EMBL ADH29990.1
Plasmid pKC396 Ref.8 EMBL ADH30040.1
Plasmid pKM101 Ref.1 Ref.2 EMBL AAA86461.1
Plasmid pLEW517 Ref.6 EMBL ABG49201.1
Plasmid pMUR050 Ref.4 Ref.5 Ref.7 EMBL ABG33821.1
Plasmid pQNR2078 Ref.9 Ref.10 EMBL CCE73956.1
OrganismEscherichia coli EMBL AAA86461.1
Taxonomic identifier562 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length177 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Ontologies

Keywords
   Molecular functionEndonuclease EMBL AAA86461.1
Hydrolase
Nuclease
   Technical term3D-structure PDB 1BYR
Plasmid EMBL AAA86461.1
Gene Ontology (GO)
   Molecular_functionendonuclease activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q46707 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: E0EFD6133C328F3E

FASTA17719,445
        10         20         30         40         50         60 
MKKLATWLLA AAFTTAALPA FAVEPSVQVG YSPEGSARVL VLSAIDSAKT SIRMMAYSFT 

        70         80         90        100        110        120 
APDIMKALVA AKKRGVDVKI VIDERGNTGR ASIAAMNYIA NSGIPLRTDS NFPIQHDKVI 

       130        140        150        160        170 
IVDNVTVETG SFNFTKAAET KNSENAVVIW NMPKLAESFL EHWQDRWNQG RDYRSSY 

« Hide

References

[1]"Common ancestry between IncN conjugal transfer genes and macromolecular export systems of plant and animal pathogens."
Pohlman R.F., Genetti H.D., Winans S.C.
Mol. Microbiol. 14:655-668(1994) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[2]"Entry exclusion of the IncN plasmid pKM101 is mediated by a single hydrophilic protein containing a lipid attachment motif."
Pohlman R.F., Genetti H.D., Winans S.C.
Plasmid 31:158-165(1994) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[3]"Crystal structure of a phospholipase D family member."
Stuckey J.A., Dixon J.E.
Nat. Struct. Biol. 6:278-284(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (2.00 ANGSTROMS) OF 23-177.
[4]"armA and aminoglycoside resistance in Escherichia coli."
Gonzalez-Zorn B., Teshager T., Casas M., Porrero M.C., Moreno M.A., Courvalin P., Dominguez L.
Emerg. Infect. Dis. 11:954-956(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[5]"Genetic basis for dissemination of armA."
Gonzalez-Zorn B., Catalan A., Escudero J.A., Dominguez L., Teshager T., Porrero C., Moreno M.A.
J. Antimicrob. Chemother. 56:583-585(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[6]"Facile recovery of individual high-molecular-weight, low-copy-number natural plasmids for genomic sequencing."
Williams L.E., Detter C., Barry K., Lapidus A., Summers A.O.
Appl. Environ. Microbiol. 72:4899-4906(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 517-2H1 EMBL ABG49201.1.
[7]Gonzalez-Zorn B., Catalan A., Moreno M.A., Dominguez L.
Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[8]"A novel IS26 structure surrounds blaCTX-M genes in different plasmids from German clinical Escherichia coli isolates."
Cullik A., Pfeifer Y., Prager R., von Baum H., Witte W.
J. Med. Microbiol. 59:580-587(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: ST131 EMBL ADH29990.1.
[9]Schwarz S.P.
Submitted (NOV-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 2078 EMBL CCE73956.1.
[10]"Detection of qnr genes among Escherichia coli isolates of animal origin and complete sequence of the conjugative qnrB19-carrying plasmid pQNR2078."
Schink A.K., Kadlec K., Schwarz S.
J. Antimicrob. Chemother. 67:1099-1102(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 2078 EMBL CCE73956.1.
[11]"Characterization of IncN plasmids carrying blaCTX-M-1 and qnr genes in Escherichia coli and Salmonella from animals, the environment and humans."
Dolejska M., Villa L., Hasman H., Hansen L., Carattoli A.
J. Antimicrob. Chemother. 68:333-339(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: HHA45 EMBL AFP24965.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U09868 Genomic DNA. Translation: AAA86461.1.
AY522431 Genomic DNA. Translation: ABG33821.1.
DQ390454 Genomic DNA. Translation: ABG49201.1.
HM138652 Genomic DNA. Translation: ADH29990.1.
HM138653 Genomic DNA. Translation: ADH30040.1.
JX065630 Genomic DNA. Translation: AFP24965.1.
HE613857 Genomic DNA. Translation: CCE73956.1.
PIRI79276.
RefSeqYP_001096362.1. NC_009132.1.
YP_003717504.1. NC_014231.1.
YP_006903017.1. NC_019033.1.
YP_006953730.1. NC_019087.1.
YP_006954498.1. NC_019098.1.
YP_724502.1. NC_007682.3.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
1BYRX-ray2.00A23-177[»]
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID13897318.
13906676.
13909226.
3861224.
4924687.
9284748.

Family and domain databases

InterProIPR025202. PLD-like_dom.
IPR001736. PLipase_D/transphosphatidylase.
[Graphical view]
PfamPF13091. PLDc_2. 1 hit.
[Graphical view]
SMARTSM00155. PLDc. 1 hit.
[Graphical view]
PROSITEPS50035. PLD. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

EvolutionaryTraceQ46707.

Entry information

Entry nameQ46707_ECOLX
AccessionPrimary (citable) accession number: Q46707
Entry history
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: May 14, 2014
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)