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Q46705

- Q46705_ECOLX

UniProt

Q46705 - Q46705_ECOLX

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Protein
Submitted name: TraF protein
Gene
traF
Organism
Escherichia coli
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. protein binding Source: IntAct
Complete GO annotation...

Protein family/group databases

TCDBi3.A.7.6.1. the type iv (conjugal dna-protein transfer or virb) secretory pathway (ivsp) family.

Names & Taxonomyi

Protein namesi
Submitted name:
TraF proteinImported
Gene namesi
Name:traFImported
Encoded oniPlasmid pKM101Imported
OrganismiEscherichia coliImported
Taxonomic identifieri562 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
traOQ467043EBI-8793037,EBI-8793050

Protein-protein interaction databases

DIPiDIP-59306N.
IntActiQ46705. 2 interactions.

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3JQOX-ray2.60A/D/G/J/M/P/S/V/Y/b/e/h/k/n160-386[»]
3ZBIelectron microscopy8.50A/D/G/J/M/P/S/V/Y/b/e/h/k/n171-386[»]
ProteinModelPortaliQ46705.

Miscellaneous databases

EvolutionaryTraceiQ46705.

Family & Domainsi

Family and domain databases

InterProiIPR005498. T4SS_VirB10/TraB/TrbI.
[Graphical view]
PfamiPF03743. TrbI. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q46705-1 [UniParc]FASTAAdd to Basket

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MARKSVDVDQ ELDENTGDGE FESERGGFNG SNRRSAPRMK AFVILMALLA    50
LVFIGITVMG KIRAPAKAEA DKDGGKAQQA NTLPNYSFNS DPDVNKPATA 100
QNSPTDARAV QAAAQADADA GSSNTGARTS NKRKEPSPEE LAMQRRLGGE 150
LAQTNQAATS NSPGAQPQDN ETSEGSSALA KNLTPARLKA SRAGVMANPS 200
LTVPKGKMIP CGTGTELDTT VPGQVSCRVS QDVYSADGLV RLIDKGSWVD 250
GQITGGIKDG QARVFVLWER IRNDQDGTIV NIDSAGTNSL GSAGIPGQVD 300
AHMWERLAGA IMISLFSDTL TALVNQTQSN NIQYNSTENS GGQLASEALR 350
SYMSIPPTLY DQQGDAVSIF VARDLDFSGV YTLADN 386
Length:386
Mass (Da):40,747
Last modified:November 1, 1996 - v1
Checksum:i3F94CFD32ED8316B
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U09868 Genomic DNA. Translation: AAA86459.1.
PIRiI79274.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U09868 Genomic DNA. Translation: AAA86459.1 .
PIRi I79274.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
3JQO X-ray 2.60 A/D/G/J/M/P/S/V/Y/b/e/h/k/n 160-386 [» ]
3ZBI electron microscopy 8.50 A/D/G/J/M/P/S/V/Y/b/e/h/k/n 171-386 [» ]
ProteinModelPortali Q46705.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

DIPi DIP-59306N.
IntActi Q46705. 2 interactions.

Protein family/group databases

TCDBi 3.A.7.6.1. the type iv (conjugal dna-protein transfer or virb) secretory pathway (ivsp) family.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Miscellaneous databases

EvolutionaryTracei Q46705.

Family and domain databases

InterProi IPR005498. T4SS_VirB10/TraB/TrbI.
[Graphical view ]
Pfami PF03743. TrbI. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Common ancestry between IncN conjugal transfer genes and macromolecular export systems of plant and animal pathogens."
    Pohlman R.F., Genetti H.D., Winans S.C.
    Mol. Microbiol. 14:655-668(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Plasmid: pKM101
  2. "Entry exclusion of the IncN plasmid pKM101 is mediated by a single hydrophilic protein containing a lipid attachment motif."
    Pohlman R.F., Genetti H.D., Winans S.C.
    Plasmid 31:158-165(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Plasmid: pKM101
  3. "Structure of the outer membrane complex of a type IV secretion system."
    Chandran V., Fronzes R., Duquerroy S., Cronin N., Navaza J., Waksman G.
    Nature 462:1011-1015(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.60 ANGSTROMS) OF 160-386.
  4. "Structure of a bacterial type IV secretion core complex at subnanometre resolution."
    Rivera-Calzada A., Fronzes R., Savva C.G., Chandran V., Lian P.W., Laeremans T., Pardon E., Steyaert J., Remaut H., Waksman G., Orlova E.V.
    EMBO J. 32:1195-1204(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY ELECTRON MICROSCOPY (8.50 ANGSTROMS) OF 171-386.

Entry informationi

Entry nameiQ46705_ECOLX
AccessioniPrimary (citable) accession number: Q46705
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: June 11, 2014
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, PlasmidImported

External Data

Dasty 3

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