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Q46704 (Q46704_ECOLX) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Interactions·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Name:traO EMBL AAA86458.1
Encoded onPlasmid pKM101 Ref.1 Ref.2 EMBL AAA86458.1
OrganismEscherichia coli EMBL AAA86458.1
Taxonomic identifier562 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length294 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Ontologies

Keywords
   Technical term3D-structure PDB 3ZBI PDB 3ZBJ PDB 3JQO PDB 2YPW
Plasmid EMBL AAA86458.1
Gene Ontology (GO)
None. [Check GOA]

Binary interactions

With

Entry

#Exp.

IntAct

Notes

traFQ467053EBI-8793050,EBI-8793037

Sequences

Sequence LengthMass (Da)Tools
Q46704 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: DCAE0E16EEB542FC

FASTA29432,872
        10         20         30         40         50         60 
MKKLLLSAVV LSVLGGAATN VMALEVGRNS PYDYRIKSVV YNPVNVVKID AVAGVATHIV 

        70         80         90        100        110        120 
VAPDETYITH AFGDSESRTF AHKMNHFFVK PKQAMSDTNL VIVTDKRTYN IVLHFIGEET 

       130        140        150        160        170        180 
KKNADGTVSK SFIETPWAVR HAVLQLTYEY PFEQQEKAKS AADKKRITQK LKQTAFAGAK 

       190        200        210        220        230        240 
NYQYVMSEQP EMRSIQPVHV WDNYRFTRFE FPANAELPQV YMISASGKET LPNSHVVGEN 

       250        260        270        280        290 
RNIIEVETVA KEWRIRLGDK VVGVRNNNFA PGRGAVATGT ASPDVRRVQI GEDN 

« Hide

References

[1]"Common ancestry between IncN conjugal transfer genes and macromolecular export systems of plant and animal pathogens."
Pohlman R.F., Genetti H.D., Winans S.C.
Mol. Microbiol. 14:655-668(1994) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[2]"Entry exclusion of the IncN plasmid pKM101 is mediated by a single hydrophilic protein containing a lipid attachment motif."
Pohlman R.F., Genetti H.D., Winans S.C.
Plasmid 31:158-165(1994) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[3]"Structure of the outer membrane complex of a type IV secretion system."
Chandran V., Fronzes R., Duquerroy S., Cronin N., Navaza J., Waksman G.
Nature 462:1011-1015(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (2.60 ANGSTROMS) OF 160-294.
[4]"Structure of a bacterial type IV secretion core complex at subnanometre resolution."
Rivera-Calzada A., Fronzes R., Savva C.G., Chandran V., Lian P.W., Laeremans T., Pardon E., Steyaert J., Remaut H., Waksman G., Orlova E.V.
EMBO J. 32:1195-1204(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: STRUCTURE BY ELECTRON MICROSCOPY (8.50 ANGSTROMS) OF 24-135.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U09868 Genomic DNA. Translation: AAA86458.1.
PIRI79273.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
2YPWelectron microscopy12.40A/B/C/D/E/F/G/H/I/J/K/L/M/N24-135[»]
3JQOX-ray2.60B/E/H/K/N/Q/T/W/Z/c/f/i/l/o160-294[»]
3ZBIelectron microscopy8.50B/E/H/K/N/Q/T/W/Z/c/f/i/l/o161-290[»]
3ZBJelectron microscopy8.50A/B/C/D/E/F/G/H/I/J/K/L/M/N24-135[»]
ProteinModelPortalQ46704.
SMRQ46704. Positions 177-271.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

DIPDIP-59308N.
IntActQ46704. 2 interactions.

Protein family/group databases

TCDB3.A.7.6.1. the type iv (conjugal dna-protein transfer or virb) secretory pathway (ivsp) family.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

InterProIPR010258. Conjugal_tfr_TrbG/VirB9/CagX.
[Graphical view]
PfamPF03524. CagX. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

EvolutionaryTraceQ46704.

Entry information

Entry nameQ46704_ECOLX
AccessionPrimary (citable) accession number: Q46704
Entry history
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: April 16, 2014
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)