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Protein
Submitted name:

TraN protein

Gene

traN

Organism
Escherichia coli
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Protein family/group databases

TCDBi3.A.7.6.1. the type iv (conjugal dna-protein transfer or virb) secretory pathway (ivsp) family.

Names & Taxonomyi

Protein namesi
Submitted name:
TraN proteinImported
Gene namesi
Name:traNImported
Encoded oniPlasmid pKM101Imported
OrganismiEscherichia coliImported
Taxonomic identifieri562 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Interactioni

Protein-protein interaction databases

DIPiDIP-59307N.
IntActiQ46702. 2 interactions.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3JQOX-ray2.60C/F/I/L/O/R/U/X/a/d/g/j/m/p15-48[»]
3ZBIelectron microscopy8.50C/F/I/L/O/R/U/X/a/d/g/j/m/p1-48[»]
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ46702.

Sequencei

Sequence statusi: Complete.

Q46702-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40 
MRSLLLMGVL LISACSSGHK PPPEPDWSNT VPVNKTIPVD TQGGRNES
Length:48
Mass (Da):5,131
Last modified:November 1, 1996 - v1
Checksum:i43ACC8EA9591FBAB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U09868 Genomic DNA. Translation: AAA86456.1.
PIRiI79271.
RefSeqiWP_010999961.1. NG_034648.1.
YP_009074493.1. NG_034648.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U09868 Genomic DNA. Translation: AAA86456.1.
PIRiI79271.
RefSeqiWP_010999961.1. NG_034648.1.
YP_009074493.1. NG_034648.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3JQOX-ray2.60C/F/I/L/O/R/U/X/a/d/g/j/m/p15-48[»]
3ZBIelectron microscopy8.50C/F/I/L/O/R/U/X/a/d/g/j/m/p1-48[»]
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-59307N.
IntActiQ46702. 2 interactions.

Protein family/group databases

TCDBi3.A.7.6.1. the type iv (conjugal dna-protein transfer or virb) secretory pathway (ivsp) family.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Miscellaneous databases

EvolutionaryTraceiQ46702.

Family and domain databases

ProtoNetiSearch...

Publicationsi

  1. "Common ancestry between IncN conjugal transfer genes and macromolecular export systems of plant and animal pathogens."
    Pohlman R.F., Genetti H.D., Winans S.C.
    Mol. Microbiol. 14:655-668(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Plasmid: pKM101
  2. "Entry exclusion of the IncN plasmid pKM101 is mediated by a single hydrophilic protein containing a lipid attachment motif."
    Pohlman R.F., Genetti H.D., Winans S.C.
    Plasmid 31:158-165(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Plasmid: pKM101
  3. "Structure of the outer membrane complex of a type IV secretion system."
    Chandran V., Fronzes R., Duquerroy S., Cronin N., Navaza J., Waksman G.
    Nature 462:1011-1015(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.60 ANGSTROMS) OF 15-48.
  4. "Structure of a bacterial type IV secretion core complex at subnanometre resolution."
    Rivera-Calzada A., Fronzes R., Savva C.G., Chandran V., Lian P.W., Laeremans T., Pardon E., Steyaert J., Remaut H., Waksman G., Orlova E.V.
    EMBO J. 32:1195-1204(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY ELECTRON MICROSCOPY (8.50 ANGSTROMS).

Entry informationi

Entry nameiQ46702_ECOLX
AccessioniPrimary (citable) accession number: Q46702
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: May 27, 2015
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, PlasmidImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.