Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

30S ribosomal protein S6e

Gene

rps6e

Organism
Methanosarcina barkeri (strain Fusaro / DSM 804)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S6eUniRule annotation
Gene namesi
Name:rps6eUniRule annotation
Ordered Locus Names:Mbar_A3383
OrganismiMethanosarcina barkeri (strain Fusaro / DSM 804)
Taxonomic identifieri269797 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanomicrobiaMethanosarcinalesMethanosarcinaceaeMethanosarcina
Proteomesi
  • UP000008156 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002586231 – 13930S ribosomal protein S6eAdd BLAST139

Interactioni

Protein-protein interaction databases

STRINGi269797.Mbar_A3383.

Structurei

3D structure databases

SMRiQ466D6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the eukaryotic ribosomal protein eS6 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG01946. Archaea.
COG2125. LUCA.
HOGENOMiHOG000226356.
KOiK02991.
OMAiDGFPMRP.
OrthoDBiPOG093Z0FEK.

Family and domain databases

HAMAPiMF_00512. Ribosomal_S6e. 1 hit.
InterProiView protein in InterPro
IPR001377. Ribosomal_S6e.
IPR020924. Ribosomal_S6e_arc.
IPR018282. Ribosomal_S6e_CS.
PANTHERiPTHR11502. PTHR11502. 1 hit.
PfamiView protein in Pfam
PF01092. Ribosomal_S6e. 1 hit.
SMARTiView protein in SMART
SM01405. Ribosomal_S6e. 1 hit.
PROSITEiView protein in PROSITE
PS00578. RIBOSOMAL_S6E. 1 hit.

Sequencei

Sequence statusi: Complete.

Q466D6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MANFKVVVSD PKEGRAYQID VKDAEANALI GKSIGDVVDG AVFGLSGYKV
60 70 80 90 100
KITGGCDGSG FVMKPDLLGP RRQRILMAVG VGYTPKHPGQ RRRKMVRGKE
110 120 130
VAPDIVQINA KVVEYGSKSI KALLGLEAPA EAPAEAPAE
Length:139
Mass (Da):14,704
Last modified:September 13, 2005 - v1
Checksum:iD895F07AFC2326B4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000099 Genomic DNA. Translation: AAZ72256.1.
RefSeqiWP_011308295.1. NC_007355.1.

Genome annotation databases

EnsemblBacteriaiAAZ72256; AAZ72256; Mbar_A3383.
GeneIDi3624820.
KEGGimba:Mbar_A3383.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiRS6E_METBF
AccessioniPrimary (citable) accession number: Q466D6
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 31, 2006
Last sequence update: September 13, 2005
Last modified: June 7, 2017
This is version 60 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families