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Protein

UPF0173 metal-dependent hydrolase Mbar_A3716

Gene

Mbar_A3716

Organism
Methanosarcina barkeri (strain Fusaro / DSM 804)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Enzyme and pathway databases

BioCyciMBAR269797:GHUW-3786-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0173 metal-dependent hydrolase Mbar_A3716UniRule annotation
Gene namesi
Ordered Locus Names:Mbar_A3716
OrganismiMethanosarcina barkeri (strain Fusaro / DSM 804)
Taxonomic identifieri269797 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanomicrobiaMethanosarcinalesMethanosarcinaceaeMethanosarcina
Proteomesi
  • UP000008156 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 230230UPF0173 metal-dependent hydrolase Mbar_A3716PRO_1000013506Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi269797.Mbar_A3716.

Structurei

3D structure databases

ProteinModelPortaliQ464W3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0173 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG00497. Archaea.
COG2220. LUCA.
HOGENOMiHOG000223952.
OMAiIGMNIGG.

Family and domain databases

Gene3Di3.60.15.10. 1 hit.
HAMAPiMF_00457. UPF0173.
InterProiIPR001279. Metallo-B-lactamas.
IPR022877. UPF0173.
[Graphical view]
SMARTiSM00849. Lactamase_B. 1 hit.
[Graphical view]
SUPFAMiSSF56281. SSF56281. 1 hit.

Sequencei

Sequence statusi: Complete.

Q464W3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVGVKITWLG HSAFLLEAEK KLLIDPFISG NPLAPCSPEE LNPDIITVTH
60 70 80 90 100
GHRDHLGDTI EIGKRTRCRI ITIHEVANYI KSKGVFAEGM GKGGTVNVEG
110 120 130 140 150
IKLTMTDALH SSSIDASGFS FDGGSPAGFI IQINGHSIYH AGDTGVFGDM
160 170 180 190 200
KLIGELYEPE LVLLPIGDKF TMGIKEATKA VELILPRTVI PMHYSTFDVI
210 220 230
KQDPEEFKRA VEAKVDTKVI IMKPGESIDL
Length:230
Mass (Da):25,010
Last modified:September 13, 2005 - v1
Checksum:iBE379AC3454C3A81
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000099 Genomic DNA. Translation: AAZ72579.1.
RefSeqiWP_011308616.1. NC_007355.1.

Genome annotation databases

EnsemblBacteriaiAAZ72579; AAZ72579; Mbar_A3716.
GeneIDi3625006.
KEGGimba:Mbar_A3716.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000099 Genomic DNA. Translation: AAZ72579.1.
RefSeqiWP_011308616.1. NC_007355.1.

3D structure databases

ProteinModelPortaliQ464W3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi269797.Mbar_A3716.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAZ72579; AAZ72579; Mbar_A3716.
GeneIDi3625006.
KEGGimba:Mbar_A3716.

Phylogenomic databases

eggNOGiarCOG00497. Archaea.
COG2220. LUCA.
HOGENOMiHOG000223952.
OMAiIGMNIGG.

Enzyme and pathway databases

BioCyciMBAR269797:GHUW-3786-MONOMER.

Family and domain databases

Gene3Di3.60.15.10. 1 hit.
HAMAPiMF_00457. UPF0173.
InterProiIPR001279. Metallo-B-lactamas.
IPR022877. UPF0173.
[Graphical view]
SMARTiSM00849. Lactamase_B. 1 hit.
[Graphical view]
SUPFAMiSSF56281. SSF56281. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The Methanosarcina barkeri genome: comparative analysis with Methanosarcina acetivorans and Methanosarcina mazei reveals extensive rearrangement within methanosarcinal genomes."
    Maeder D.L., Anderson I., Brettin T.S., Bruce D.C., Gilna P., Han C.S., Lapidus A., Metcalf W.W., Saunders E., Tapia R., Sowers K.R.
    J. Bacteriol. 188:7922-7931(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Fusaro / DSM 804.

Entry informationi

Entry nameiY3716_METBF
AccessioniPrimary (citable) accession number: Q464W3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: September 13, 2005
Last modified: December 9, 2015
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.