Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q45UF6

- NSP1N_ROTJ1

UniProt

Q45UF6 - NSP1N_ROTJ1

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

Non-structural protein 1

Gene
N/A
Organism
Rotavirus B (isolate Human/China/ADRV-N J19/1997) (RV ADRV-N) (Rotavirus (isolate novel adult diarrhea rotavirus-J19))
Status
Reviewed - Annotation score: 1 out of 5- Protein inferred from homologyi

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sitei326 – 3272Cleavage; by autolysisSequence Analysis

GO - Molecular functioni

  1. RNA binding Source: UniProtKB-KW
Complete GO annotation...

Keywords - Ligandi

RNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Non-structural protein 1
Short name:
NSP1
OrganismiRotavirus B (isolate Human/China/ADRV-N J19/1997) (RV ADRV-N) (Rotavirus (isolate novel adult diarrhea rotavirus-J19))
Taxonomic identifieri335103 [NCBI]
Taxonomic lineageiVirusesdsRNA virusesReoviridaeSedoreovirinaeRotavirusunclassified rotaviruses
Virus hostiHomo sapiens (Human) [TaxID: 9606]
ProteomesiUP000007663: Genome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 395395Non-structural protein 1PRO_0000369859Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliQ45UF6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini328 – 39568DRBMPROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 DRBM (double-stranded RNA-binding) domain.PROSITE-ProRule annotation

Family and domain databases

Gene3Di3.30.160.20. 1 hit.
InterProiIPR014720. dsRNA-bd_dom.
[Graphical view]
PfamiPF00035. dsrm. 1 hit.
[Graphical view]
SMARTiSM00358. DSRM. 1 hit.
[Graphical view]
PROSITEiPS50137. DS_RBD. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q45UF6-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MMSIQRAAQI NRQFDYMSIK ELWMAKFPLH KPGDCLDMFK NGDYTGPTMG
60 70 80 90 100
CIQKTKASKK NTIFHIKSDF NSTEYDEPPI SGFKMFTQHC CQRIDEHFCG
110 120 130 140 150
ALHPVISNIE FEHNQLKTRP QVASELNLFI PCGIKNLKIE SGEKSTWIVG
160 170 180 190 200
TKFRKCMCLK PVIVAATIIG TPINKNLITF CSSDYIQVIV NRNREGSCGI
210 220 230 240 250
CMGNVSTYEA CGNWTNETWG EEFSLDLKLC YKCTPVAFIF SLMMSTGHKP
260 270 280 290 300
YVSKKQFEEN RRKWERVLNY KICKENLDSH LACANHENVY KSIKKYEFFD
310 320 330 340 350
SVWVYHLANS SWVRDLTREC IESNPGPNYI QLLNEHSQRY GFVQPTYEII
360 370 380 390
AVVSDGHHSY QCTCYYKDMK TQSTGPSKKN AKHQAAEQMF RHQCF
Length:395
Mass (Da):45,649
Last modified:September 13, 2005 - v1
Checksum:i19D9915601794AB4
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AY632079 Genomic RNA. Translation: AAU88188.1.
DQ113901 Genomic RNA. Translation: AAZ03489.1.
RefSeqiYP_392494.1. NC_007552.1.

Genome annotation databases

GeneIDi5076654.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AY632079 Genomic RNA. Translation: AAU88188.1 .
DQ113901 Genomic RNA. Translation: AAZ03489.1 .
RefSeqi YP_392494.1. NC_007552.1.

3D structure databases

ProteinModelPortali Q45UF6.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 5076654.

Family and domain databases

Gene3Di 3.30.160.20. 1 hit.
InterProi IPR014720. dsRNA-bd_dom.
[Graphical view ]
Pfami PF00035. dsrm. 1 hit.
[Graphical view ]
SMARTi SM00358. DSRM. 1 hit.
[Graphical view ]
PROSITEi PS50137. DS_RBD. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Cloning and sequence analysis of dsRNA segments 5, 6 and 7 of a novel non-group A, B, C adult rotavirus that caused an outbreak of gastroenteritis in China."
    Yang H., Makeyev E.V., Kang Z., Ji S., Bamford D.H., van Dijk A.A.
    Virus Res. 106:15-26(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].
  2. "Molecular characterization of a novel adult diarrhoea rotavirus strain J19 isolated in China and its significance for the evolution and origin of group B rotaviruses."
    Jiang S., Ji S., Tang Q., Cui X., Yang H., Kan B., Gao S.
    J. Gen. Virol. 89:2622-2629(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Entry informationi

Entry nameiNSP1N_ROTJ1
AccessioniPrimary (citable) accession number: Q45UF6
Secondary accession number(s): Q5Y9B1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: September 13, 2005
Last modified: October 1, 2014
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3