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Q45UF6 (NSP1N_ROTJ1) Reviewed, UniProtKB/Swiss-Prot

Last modified October 16, 2013. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein attributes

Sequence length395 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 1 DRBM (double-stranded RNA-binding) domain.

Ontologies

Keywords
   LigandRNA-binding
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Molecular_functionRNA binding

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 395395Non-structural protein 1
PRO_0000369859

Regions

Domain328 – 39568DRBM

Sites

Site326 – 3272Cleavage; by autolysis Potential

Sequences

Sequence LengthMass (Da)Tools
Q45UF6 [UniParc].

Last modified September 13, 2005. Version 1.
Checksum: 19D9915601794AB4

FASTA39545,649
        10         20         30         40         50         60 
MMSIQRAAQI NRQFDYMSIK ELWMAKFPLH KPGDCLDMFK NGDYTGPTMG CIQKTKASKK 

        70         80         90        100        110        120 
NTIFHIKSDF NSTEYDEPPI SGFKMFTQHC CQRIDEHFCG ALHPVISNIE FEHNQLKTRP 

       130        140        150        160        170        180 
QVASELNLFI PCGIKNLKIE SGEKSTWIVG TKFRKCMCLK PVIVAATIIG TPINKNLITF 

       190        200        210        220        230        240 
CSSDYIQVIV NRNREGSCGI CMGNVSTYEA CGNWTNETWG EEFSLDLKLC YKCTPVAFIF 

       250        260        270        280        290        300 
SLMMSTGHKP YVSKKQFEEN RRKWERVLNY KICKENLDSH LACANHENVY KSIKKYEFFD 

       310        320        330        340        350        360 
SVWVYHLANS SWVRDLTREC IESNPGPNYI QLLNEHSQRY GFVQPTYEII AVVSDGHHSY 

       370        380        390 
QCTCYYKDMK TQSTGPSKKN AKHQAAEQMF RHQCF 

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References

[1]"Cloning and sequence analysis of dsRNA segments 5, 6 and 7 of a novel non-group A, B, C adult rotavirus that caused an outbreak of gastroenteritis in China."
Yang H., Makeyev E.V., Kang Z., Ji S., Bamford D.H., van Dijk A.A.
Virus Res. 106:15-26(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].
[2]"Molecular characterization of a novel adult diarrhoea rotavirus strain J19 isolated in China and its significance for the evolution and origin of group B rotaviruses."
Jiang S., Ji S., Tang Q., Cui X., Yang H., Kan B., Gao S.
J. Gen. Virol. 89:2622-2629(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AY632079 Genomic RNA. Translation: AAU88188.1.
DQ113901 Genomic RNA. Translation: AAZ03489.1.
RefSeqYP_392494.1. NC_007552.1.

3D structure databases

ProteinModelPortalQ45UF6.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5076654.

Family and domain databases

Gene3D3.30.160.20. 1 hit.
InterProIPR014720. dsRNA-bd_dom.
[Graphical view]
PfamPF00035. dsrm. 1 hit.
[Graphical view]
SMARTSM00358. DSRM. 1 hit.
[Graphical view]
PROSITEPS50137. DS_RBD. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameNSP1N_ROTJ1
AccessionPrimary (citable) accession number: Q45UF6
Secondary accession number(s): Q5Y9B1
Entry history
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: September 13, 2005
Last modified: October 16, 2013
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families