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Protein

Ferredoxin-1

Gene

fdxA

Organism
Caulobacter crescentus (strain ATCC 19089 / CB15)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Cofactori

Protein has several cofactor binding sites:

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi9 – 91Iron-sulfur 1 (3Fe-4S)By similarity
Metal bindingi17 – 171Iron-sulfur 1 (3Fe-4S)By similarity
Metal bindingi21 – 211Iron-sulfur 2 (4Fe-4S)By similarity
Metal bindingi40 – 401Iron-sulfur 2 (4Fe-4S)By similarity
Metal bindingi43 – 431Iron-sulfur 2 (4Fe-4S)By similarity
Metal bindingi46 – 461Iron-sulfur 2 (4Fe-4S)By similarity
Metal bindingi50 – 501Iron-sulfur 1 (3Fe-4S)By similarity

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Electron transport, Transport

Keywords - Ligandi

3Fe-4S, 4Fe-4S, Iron, Iron-sulfur, Metal-binding

Enzyme and pathway databases

BioCyciCAULO:CC0654-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Ferredoxin-1
Alternative name(s):
Ferredoxin I
Short name:
FdI
Gene namesi
Name:fdxA
Ordered Locus Names:CC_0654
OrganismiCaulobacter crescentus (strain ATCC 19089 / CB15)
Taxonomic identifieri190650 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaCaulobacteralesCaulobacteraceaeCaulobacter
Proteomesi
  • UP000001816 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methionineiRemovedBy similarity
Chaini2 – 113112Ferredoxin-1PRO_0000159096Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi190650.CC_0654.

Structurei

3D structure databases

ProteinModelPortaliQ45972.
SMRiQ45972. Positions 3-102.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini2 – 30294Fe-4S ferredoxin-type 1PROSITE-ProRule annotationAdd
BLAST
Domaini31 – 60304Fe-4S ferredoxin-type 2PROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 2 4Fe-4S ferredoxin-type domains.PROSITE-ProRule annotation

Keywords - Domaini

Repeat

Phylogenomic databases

eggNOGiENOG4108Z4U. Bacteria.
COG1146. LUCA.
HOGENOMiHOG000044610.
KOiK05524.
OMAiDNCIHCK.

Family and domain databases

InterProiIPR017896. 4Fe4S_Fe-S-bd.
IPR017900. 4Fe4S_Fe_S_CS.
IPR000813. 7Fe_ferredoxin.
IPR022569. Fd_C.
[Graphical view]
PfamiPF11953. DUF3470. 1 hit.
PF00037. Fer4. 1 hit.
[Graphical view]
PRINTSiPR00354. 7FE8SFRDOXIN.
PROSITEiPS00198. 4FE4S_FER_1. 1 hit.
PS51379. 4FE4S_FER_2. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q45972-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTYIVTDACV RCKFMDCVEV CPVDCFYEGE NFLVINPDEC IDCGVCEPEC
60 70 80 90 100
PVDAIKPDTE DEADGKWLKI NADYAKVWPN ITVKGEPPAD REDFERETGK
110
FEKYFSEKPG KGS
Length:113
Mass (Da):12,788
Last modified:January 23, 2007 - v3
Checksum:i8F5C34B6D18522D5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U10035 Genomic DNA. Translation: AAA85787.1.
AE005673 Genomic DNA. Translation: AAK22639.1.
PIRiA57141.
RefSeqiNP_419471.1. NC_002696.2.
WP_010918540.1. NC_002696.2.

Genome annotation databases

EnsemblBacteriaiAAK22639; AAK22639; CC_0654.
GeneIDi942583.
KEGGiccr:CC_0654.
PATRICi21298260. VBICauCre124313_0665.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U10035 Genomic DNA. Translation: AAA85787.1.
AE005673 Genomic DNA. Translation: AAK22639.1.
PIRiA57141.
RefSeqiNP_419471.1. NC_002696.2.
WP_010918540.1. NC_002696.2.

3D structure databases

ProteinModelPortaliQ45972.
SMRiQ45972. Positions 3-102.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi190650.CC_0654.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAK22639; AAK22639; CC_0654.
GeneIDi942583.
KEGGiccr:CC_0654.
PATRICi21298260. VBICauCre124313_0665.

Phylogenomic databases

eggNOGiENOG4108Z4U. Bacteria.
COG1146. LUCA.
HOGENOMiHOG000044610.
KOiK05524.
OMAiDNCIHCK.

Enzyme and pathway databases

BioCyciCAULO:CC0654-MONOMER.

Family and domain databases

InterProiIPR017896. 4Fe4S_Fe-S-bd.
IPR017900. 4Fe4S_Fe_S_CS.
IPR000813. 7Fe_ferredoxin.
IPR022569. Fd_C.
[Graphical view]
PfamiPF11953. DUF3470. 1 hit.
PF00037. Fer4. 1 hit.
[Graphical view]
PRINTSiPR00354. 7FE8SFRDOXIN.
PROSITEiPS00198. 4FE4S_FER_1. 1 hit.
PS51379. 4FE4S_FER_2. 2 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiFER1_CAUCR
AccessioniPrimary (citable) accession number: Q45972
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: January 23, 2007
Last modified: September 7, 2016
This is version 102 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.