Transposase for insertion sequence element IS1111A - Coxiella burnetii

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Reviewed, UniProtKB/Swiss-Prot Q45968 (TRA1_COXBU)

Last modified December 15, 2009. Version 47. History...

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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein names

Recommended name:
Transposase for insertion sequence element IS1111A

Gene names

Ordered Locus Names:	CBU_0006
AND
Ordered Locus Names:	CBU_0040
AND
Ordered Locus Names:	CBU_0384
AND
Ordered Locus Names:	CBU_0523
AND
Ordered Locus Names:	CBU_0554
AND
Ordered Locus Names:	CBU_1090
AND
Ordered Locus Names:	CBU_1186
AND
Ordered Locus Names:	CBU_1217.1
ORF Names:	CBU_1217a
AND
Ordered Locus Names:	CBU_1570.2
ORF Names:	CBU_1570b
AND
Ordered Locus Names:	CBU_1590.2
ORF Names:	CBU_1590b
AND
Ordered Locus Names:	CBU_1639.3
ORF Names:	CBU_1639c
AND
Ordered Locus Names:	CBU_1699.1
ORF Names:	CBU_1699a
AND
Ordered Locus Names:	CBU_1716.1
ORF Names:	CBU_1716a
AND
Ordered Locus Names:	CBU_1758.1
ORF Names:	CBU_1758a
AND
Ordered Locus Names:	CBU_1896.1
ORF Names:	CBU_1896a
AND
Ordered Locus Names:	CBU_1959.2
ORF Names:	CBU_1959b
AND
Ordered Locus Names:	CBU_1987.2
ORF Names:	CBU_1987b

Organism

Coxiella burnetii [Complete proteome] [HAMAP]

Taxonomic identifier

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Legionellales › Coxiellaceae › Coxiella

Protein attributes

Sequence length	364 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Function	Required for the transposition of the insertion element Potential.
Sequence similarities	Belongs to the transposase IS1111A/IS1328/IS1533 family.

Ontologies

Keywords
Biological process	DNA recombination Transposition
Ligand	DNA-binding
Technical term	Complete proteome Transposable element
Gene Ontology (GO)
Biological process	transposition, DNA-mediated Inferred from electronic annotation. Source: InterPro
Molecular function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW transposase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Molecule processing

Chain

364

Transposase for insertion sequence element IS1111A

PRO_0000075452

Sequences

Sequence

Length

Mass (Da)

Tools

Q45968-1 [UniParc].

Last modified December 16, 2008. Version 2.
Checksum: 4ECF611A0A335CE3
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364

41,052

        10         20         30         40         50         60 
MDPPLKDGVI MRQHRISIFK KRRRSMKDIK ILGVDIAKDV FQLCGIDEWG KVIYTRRVKR 

        70         80         90        100        110        120 
AQYVSTVASL KVGCVVMEAC GGANHWYRTF MGMGIPTQLI SPQHVKPYVK SNKNDRNDAQ 

       130        140        150        160        170        180 
AIAEAASRAS MRFVQGKTVE QQDVQALLKI RDRLVKSRTA LINEIRGLLQ EYGLTMARGA 

       190        200        210        220        230        240 
KRFYEELPLI LASEAVGLTP RMKRVLNCLY TELLNRDEAI GDYEEELKAV AKANEDCQRV 

       250        260        270        280        290        300 
QSIPGVGYLT ALSVYASVGD IHQFHRSRQL SAFIGLVPRQ HSSGNKEVLL GISKRGNVML 

       310        320        330        340        350        360 
RTLLIHGARA LLRHVKNKTD KKSLWLKALI ERRGMNRACV ALANKNAPII WALLTRQETY 


RCGA

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"A Coxiella burnetti repeated DNA element resembling a bacterial insertion sequence." Hoover T.A., Vodkin M.H., Williams J.C. J. Bacteriol. 174:5540-5548(1992) [PubMed: 1324903] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[2]	"Complete genome sequence of the Q-fever pathogen, Coxiella burnetii." Seshadri R., Paulsen I.T., Eisen J.A., Read T.D., Nelson K.E., Nelson W.C., Ward N.L., Tettelin H., Davidsen T.M., Beanan M.J., DeBoy R.T., Daugherty S.C., Brinkac L.M., Madupu R., Dodson R.J., Khouri H.M., Lee K.H., Carty H.A. Heidelberg J.F. Proc. Natl. Acad. Sci. U.S.A. 100:5455-5460(2003) [PubMed: 12704232] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Nine Mile phase I / RSA 493.

Cross-references

Sequence databases
	M80806 Genomic DNA. Translation: AAA23313.1. Different initiation. AE016828 Genomic DNA. Translation: AAO89576.2. AE016828 Genomic DNA. Translation: AAO89609.2. AE016828 Genomic DNA. Translation: AAO89937.2. AE016828 Genomic DNA. Translation: AAO90069.2. AE016828 Genomic DNA. Translation: AAO90099.2. AE016828 Genomic DNA. Translation: AAO90603.2. AE016828 Genomic DNA. Translation: AAO90695.2. AE016828 Genomic DNA. Translation: ACI15282.1. AE016828 Genomic DNA. Translation: ACI15305.1. AE016828 Genomic DNA. Translation: ACI15307.1. AE016828 Genomic DNA. Translation: ACI15309.1. AE016828 Genomic DNA. Translation: ACI15313.1. AE016828 Genomic DNA. Translation: ACI15315.1. AE016828 Genomic DNA. Translation: ACI15319.1. Different initiation. AE016828 Genomic DNA. Translation: ACI15329.1. AE016828 Genomic DNA. Translation: ACI15335.1. AE016828 Genomic DNA. Translation: ACI15337.1.
RefSeq	NP_819062.2. NP_819095.2. NP_819423.2. NP_819555.2. NP_819585.2. NP_820089.2. NP_820181.2. YP_002332991.1. YP_002333014.1. YP_002333016.1. YP_002333018.1. YP_002333022.1. YP_002333024.1. YP_002333028.1. YP_002333038.1. YP_002333044.1. YP_002333046.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	1207902. 1207926. 1208267. 1208408. 1208439. 1208991. 1209090. 1209123. 1209481. 1209501. 1209551. 1209611. 1209628. 1209670. 1209811. 1209874. 1209903.
GenomeReviews	Gene locus CBU_0006 in contig AE016828_GR. Gene locus CBU_0040 in contig AE016828_GR. Gene locus CBU_0384 in contig AE016828_GR. Gene locus CBU_0523 in contig AE016828_GR. Gene locus CBU_0554 in contig AE016828_GR. Gene locus CBU_1090 in contig AE016828_GR. Gene locus CBU_1186 in contig AE016828_GR. Gene locus CBU_1217.1 in contig AE016828_GR. Gene locus CBU_1217a in contig AE016828_GR. Gene locus CBU_1570.2 in contig AE016828_GR. Gene locus CBU_1570b in contig AE016828_GR. Gene locus CBU_1590.2 in contig AE016828_GR. Gene locus CBU_1590b in contig AE016828_GR. Gene locus CBU_1639.3 in contig AE016828_GR. Gene locus CBU_1639c in contig AE016828_GR. Gene locus CBU_1699.1 in contig AE016828_GR. Gene locus CBU_1699a in contig AE016828_GR.
KEGG	cbu:CBU_0006. cbu:CBU_0040. cbu:CBU_0384. cbu:CBU_0523. cbu:CBU_0554. cbu:CBU_1090. cbu:CBU_1186.
TIGR	CBU_0006. CBU_0040. CBU_0384. CBU_0523. CBU_0554. CBU_1090. CBU_1186. CBU_1217.1. CBU_1570.2. CBU_1590.2. CBU_1639.3. CBU_1699.1. CBU_1716.1. CBU_1758.1. CBU_1896.1. CBU_1959.2. CBU_1987.2.
Phylogenomic databases
HOGENOM	HBG469448.
Enzyme and pathway databases
BioCyc	CBUR227377:CBU_0006-MON. CBUR227377:CBU_0040-MON. CBUR227377:CBU_0384-MON. CBUR227377:CBU_0523-MON. CBUR227377:CBU_0554-MON. CBUR227377:CBU_1090-MON. CBUR227377:CBU_1186-MON. CBUR227377:CBU_1218-MON. CBUR227377:CBU_1571-MON. CBUR227377:CBU_1591-MON. CBUR227377:CBU_1640-MON. CBUR227377:CBU_1700-MON. CBUR227377:CBU_1717-MON. CBUR227377:CBU_1759-MON. CBUR227377:CBU_1898-MON. CBUR227377:CBU_1961-MON. CBUR227377:CBU_1990-MON.
Family and domain databases
InterPro	IPR003346. Transposase_20. IPR002525. Transposase_9. [Graphical view]
Pfam	PF02371. Transposase_20. 1 hit. PF01548. Transposase_9. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

TRA1_COXBU

Accession

Primary (citable) accession number: Q45968
Secondary accession number(s): B5QSB8, B5QSF5

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 1, 1997
Last sequence update:	December 16, 2008
Last modified:	December 15, 2009
This is version 47 of the entry and version 2 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

Relevant documents

Coxiella burnetii

Coxiella burnetii (strain RSA 493): entries and gene names

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents