Transposase for insertion sequence element IS1111A - Coxiella burnetii (strain RSA 493 / Nine Mile phase I)

Contribute

Send feedback

Read comments (?) or add your own

Q45968 (TRA1_COXBU) Reviewed, UniProtKB/Swiss-Prot

Last modified May 1, 2013. Version 64. History...

Clusters with 100%, 90%, 50% identity |

Documents (2) |

Third-party data

text xml rdf/xml gff fasta

Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents Customize order

Names and origin

Protein names

Recommended name:
Transposase for insertion sequence element IS1111A

Gene names

Ordered Locus Names:	CBU_0006
AND
Ordered Locus Names:	CBU_0040
AND
Ordered Locus Names:	CBU_0384
AND
Ordered Locus Names:	CBU_0523
AND
Ordered Locus Names:	CBU_0554
AND
Ordered Locus Names:	CBU_1090
AND
Ordered Locus Names:	CBU_1186
AND
Ordered Locus Names:	CBU_1217.1
ORF Names:	CBU_1217a
AND
Ordered Locus Names:	CBU_1570.2
ORF Names:	CBU_1570b
AND
Ordered Locus Names:	CBU_1590.2
ORF Names:	CBU_1590b
AND
Ordered Locus Names:	CBU_1639.3
ORF Names:	CBU_1639c
AND
Ordered Locus Names:	CBU_1699.1
ORF Names:	CBU_1699a
AND
Ordered Locus Names:	CBU_1716.1
ORF Names:	CBU_1716a
AND
Ordered Locus Names:	CBU_1758.1
ORF Names:	CBU_1758a
AND
Ordered Locus Names:	CBU_1896.1
ORF Names:	CBU_1896a
AND
Ordered Locus Names:	CBU_1959.2
ORF Names:	CBU_1959b
AND
Ordered Locus Names:	CBU_1987.2
ORF Names:	CBU_1987b

Organism

Coxiella burnetii (strain RSA 493 / Nine Mile phase I) [Reference proteome] [HAMAP]

Taxonomic identifier

227377 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Legionellales › Coxiellaceae › Coxiella ›

Protein attributes

Sequence length	364 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function

Required for the transposition of the insertion element Potential.

Sequence similarities

Belongs to the transposase IS1111A/IS1328/IS1533 family.

Sequence caution

The sequence AAA23313.1 differs from that shown. Reason: Erroneous initiation.

The sequence ACI15319.1 differs from that shown. Reason: Erroneous initiation.

Ontologies

Keywords
Biological process	DNA recombination Transposition
Ligand	DNA-binding
Technical term	Complete proteome Reference proteome Transposable element
Gene Ontology (GO)
Biological_process	transposition, DNA-mediated Inferred from electronic annotation. Source: InterPro
Molecular_function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW transposase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Molecule processing

Chain

1 – 364

364

Transposase for insertion sequence element IS1111A

PRO_0000075452

Sequences

Sequence

Length

Mass (Da)

Tools

Q45968 [UniParc].

Last modified December 16, 2008. Version 2.
Checksum: 4ECF611A0A335CE3
Show »

FASTA

364

41,052

        10         20         30         40         50         60 
MDPPLKDGVI MRQHRISIFK KRRRSMKDIK ILGVDIAKDV FQLCGIDEWG KVIYTRRVKR 

        70         80         90        100        110        120 
AQYVSTVASL KVGCVVMEAC GGANHWYRTF MGMGIPTQLI SPQHVKPYVK SNKNDRNDAQ 

       130        140        150        160        170        180 
AIAEAASRAS MRFVQGKTVE QQDVQALLKI RDRLVKSRTA LINEIRGLLQ EYGLTMARGA 

       190        200        210        220        230        240 
KRFYEELPLI LASEAVGLTP RMKRVLNCLY TELLNRDEAI GDYEEELKAV AKANEDCQRV 

       250        260        270        280        290        300 
QSIPGVGYLT ALSVYASVGD IHQFHRSRQL SAFIGLVPRQ HSSGNKEVLL GISKRGNVML 

       310        320        330        340        350        360 
RTLLIHGARA LLRHVKNKTD KKSLWLKALI ERRGMNRACV ALANKNAPII WALLTRQETY 


RCGA

« Hide

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"A Coxiella burnetti repeated DNA element resembling a bacterial insertion sequence." Hoover T.A., Vodkin M.H., Williams J.C. J. Bacteriol. 174:5540-5548(1992) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[2]	"Complete genome sequence of the Q-fever pathogen, Coxiella burnetii." Seshadri R., Paulsen I.T., Eisen J.A., Read T.D., Nelson K.E., Nelson W.C., Ward N.L., Tettelin H., Davidsen T.M., Beanan M.J., DeBoy R.T., Daugherty S.C., Brinkac L.M., Madupu R., Dodson R.J., Khouri H.M., Lee K.H., Carty H.A. Heidelberg J.F. Proc. Natl. Acad. Sci. U.S.A. 100:5455-5460(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: RSA 493 / Nine Mile phase I.

Cross-references

Sequence databases
EMBL GenBank DDBJ	M80806 Genomic DNA. Translation: AAA23313.1. Different initiation. AE016828 Genomic DNA. Translation: AAO89576.2. AE016828 Genomic DNA. Translation: AAO89609.2. AE016828 Genomic DNA. Translation: AAO89937.2. AE016828 Genomic DNA. Translation: AAO90069.2. AE016828 Genomic DNA. Translation: AAO90099.2. AE016828 Genomic DNA. Translation: AAO90603.2. AE016828 Genomic DNA. Translation: AAO90695.2. AE016828 Genomic DNA. Translation: ACI15282.1. AE016828 Genomic DNA. Translation: ACI15305.1. AE016828 Genomic DNA. Translation: ACI15307.1. AE016828 Genomic DNA. Translation: ACI15309.1. AE016828 Genomic DNA. Translation: ACI15313.1. AE016828 Genomic DNA. Translation: ACI15315.1. AE016828 Genomic DNA. Translation: ACI15319.1. Different initiation. AE016828 Genomic DNA. Translation: ACI15329.1. AE016828 Genomic DNA. Translation: ACI15335.1. AE016828 Genomic DNA. Translation: ACI15337.1.
RefSeq	NP_819062.2. NC_002971.3. NP_819095.2. NC_002971.3. NP_819423.2. NC_002971.3. NP_819555.2. NC_002971.3. NP_819585.2. NC_002971.3. NP_820089.2. NC_002971.3. NP_820181.2. NC_002971.3. YP_002332991.1. NC_002971.3. YP_002333014.1. NC_002971.3. YP_002333016.1. NC_002971.3. YP_002333018.1. NC_002971.3. YP_002333022.1. NC_002971.3. YP_002333024.1. NC_002971.3. YP_002333028.1. NC_002971.3. YP_002333038.1. NC_002971.3. YP_002333044.1. NC_002971.3. YP_002333046.1. NC_002971.3.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	227377.CBU_1987b.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAO89576; AAO89576; CBU_0006. AAO89609; AAO89609; CBU_0040. AAO89937; AAO89937; CBU_0384. AAO90069; AAO90069; CBU_0523. AAO90099; AAO90099; CBU_0554. AAO90603; AAO90603; CBU_1090. AAO90695; AAO90695; CBU_1186. ACI15282; ACI15282; CBU_1217a. ACI15305; ACI15305; CBU_1570b. ACI15307; ACI15307; CBU_1590b. ACI15309; ACI15309; CBU_1639c. ACI15313; ACI15313; CBU_1699a. ACI15315; ACI15315; CBU_1716a. ACI15319; ACI15319; CBU_1758a. ACI15329; ACI15329; CBU_1896a. ACI15335; ACI15335; CBU_1959b. ACI15337; ACI15337; CBU_1987b.
GeneID	1207902. 1207926. 1208267. 1208408. 1208439. 1208991. 1209090. 1209123. 1209481. 1209501. 1209551. 1209611. 1209628. 1209670. 1209811. 1209874. 1209903.
KEGG	cbu:CBU_0006. cbu:CBU_0040. cbu:CBU_0384. cbu:CBU_0523. cbu:CBU_0554. cbu:CBU_1090. cbu:CBU_1186. cbu:CBU_1217a. cbu:CBU_1570b. cbu:CBU_1590b. cbu:CBU_1639c. cbu:CBU_1699a. cbu:CBU_1716a. cbu:CBU_1758a. cbu:CBU_1896a. cbu:CBU_1959b. cbu:CBU_1987b.
Phylogenomic databases
eggNOG	COG3547.
HOGENOM	HOG000255700.
OMA	NINQRIL.
ProtClustDB	CLSK913768.
Enzyme and pathway databases
BioCyc	CBUR227377:GJ7S-1082-MONOMER. CBUR227377:GJ7S-1173-MONOMER. CBUR227377:GJ7S-1205-MONOMER. CBUR227377:GJ7S-1551-MONOMER. CBUR227377:GJ7S-1571-MONOMER. CBUR227377:GJ7S-1614-MONOMER. CBUR227377:GJ7S-1671-MONOMER. CBUR227377:GJ7S-1689-MONOMER. CBUR227377:GJ7S-1732-MONOMER. CBUR227377:GJ7S-1873-MONOMER. CBUR227377:GJ7S-1936-MONOMER. CBUR227377:GJ7S-1962-MONOMER. CBUR227377:GJ7S-385-MONOMER. CBUR227377:GJ7S-43-MONOMER. CBUR227377:GJ7S-526-MONOMER. CBUR227377:GJ7S-556-MONOMER. CBUR227377:GJ7S-6-MONOMER.
Family and domain databases
InterPro	IPR003346. Transposase_20. IPR002525. Transposase_N. [Graphical view]
Pfam	PF01548. DEDD_Tnp_IS110. 1 hit. PF02371. Transposase_20. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

TRA1_COXBU

Accession

Primary (citable) accession number: Q45968
Secondary accession number(s): B5QSB8, B5QSF5

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 1, 1997
Last sequence update:	December 16, 2008
Last modified:	May 1, 2013
This is version 64 of the entry and version 2 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program

Relevant documents

Coxiella burnetii

Coxiella burnetii (strain RSA 493): entries and gene names

SIMILARITY comments

Index of protein domains and families

Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents

Preferred order of sections

Names and origin

Protein attributes

General annotation (Comments)

Ontologies

Sequence annotation (Features)

Molecule processing

Sequences

References

Cross-references

Sequence databases

3D structure databases

Protein-protein interaction databases

Protocols and materials databases

Genome annotation databases

Phylogenomic databases

Enzyme and pathway databases

Family and domain databases

Entry information

Relevant documents