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Q45589

- YBBP_BACSU

UniProt

Q45589 - YBBP_BACSU

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Protein
Uncharacterized protein YbbP
Gene
ybbP, BSU01750
Organism
Bacillus subtilis (strain 168)
Status
Reviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciBSUB:BSU01750-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YbbP
Gene namesi
Name:ybbP
Ordered Locus Names:BSU01750
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000001570: Chromosome

Organism-specific databases

GenoListiBSU01750.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei12 – 3221Helical; Reviewed prediction
Add
BLAST
Transmembranei40 – 6021Helical; Reviewed prediction
Add
BLAST
Transmembranei61 – 8121Helical; Reviewed prediction
Add
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
  2. plasma membrane Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 273273Uncharacterized protein YbbP
PRO_0000360441Add
BLAST

Proteomic databases

PaxDbiQ45589.

Interactioni

Protein-protein interaction databases

STRINGi224308.BSU01750.

Structurei

3D structure databases

ProteinModelPortaliQ45589.
SMRiQ45589. Positions 60-238.

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiCOG1624.
HOGENOMiHOG000054800.
OrthoDBiEOG6DRPM4.
PhylomeDBiQ45589.

Family and domain databases

InterProiIPR014046. c-di-AMP_synthase_like.
IPR003390. DNA_integrity_scan_DisA_N.
[Graphical view]
PfamiPF02457. DisA_N. 1 hit.
[Graphical view]
PIRSFiPIRSF004793. UCP004793. 1 hit.
TIGRFAMsiTIGR00159. TIGR00159. 1 hit.

Sequencei

Sequence statusi: Complete.

Q45589-1 [UniParc]FASTAAdd to Basket

« Hide

MAFEDIPFLQ YLGNAVDILL VWYVIYKLIM VIRGTKAVQL LKGIVVIVLV    50
RMASQYLGLS TLQWLMDQAI TWGFLAIIII FQPELRRALE QLGRGRFFSR 100
SGTPVEEAQQ KTIEAITKAI NYMAKRRIGA LLTIERDTGM GDYIETGIPL 150
NAKVSSELLI NIFIPNTPLH DGAVIMKNNE IAAAACYLPL SESPFISKEL 200
GTRHRAAVGI SEVTDSLTII VSEETGGVSV AKNGDLHREL TEEALKEMLE 250
AEFKKNTRDT SSNRWYWRGK KNG 273
Length:273
Mass (Da):30,547
Last modified:June 16, 2009 - v3
Checksum:i29F2984C5F90007C
GO

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti270 – 2701K → R in BAA19509. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AB002150 Genomic DNA. Translation: BAA19509.1.
AL009126 Genomic DNA. Translation: CAB11951.2.
PIRiH69744.
RefSeqiNP_388056.2. NC_000964.3.

Genome annotation databases

EnsemblBacteriaiCAB11951; CAB11951; BSU01750.
GeneIDi938735.
KEGGibsu:BSU01750.
PATRICi18971903. VBIBacSub10457_0180.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AB002150 Genomic DNA. Translation: BAA19509.1 .
AL009126 Genomic DNA. Translation: CAB11951.2 .
PIRi H69744.
RefSeqi NP_388056.2. NC_000964.3.

3D structure databases

ProteinModelPortali Q45589.
SMRi Q45589. Positions 60-238.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 224308.BSU01750.

Proteomic databases

PaxDbi Q45589.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAB11951 ; CAB11951 ; BSU01750 .
GeneIDi 938735.
KEGGi bsu:BSU01750.
PATRICi 18971903. VBIBacSub10457_0180.

Organism-specific databases

GenoListi BSU01750.

Phylogenomic databases

eggNOGi COG1624.
HOGENOMi HOG000054800.
OrthoDBi EOG6DRPM4.
PhylomeDBi Q45589.

Enzyme and pathway databases

BioCyci BSUB:BSU01750-MONOMER.

Family and domain databases

InterProi IPR014046. c-di-AMP_synthase_like.
IPR003390. DNA_integrity_scan_DisA_N.
[Graphical view ]
Pfami PF02457. DisA_N. 1 hit.
[Graphical view ]
PIRSFi PIRSF004793. UCP004793. 1 hit.
TIGRFAMsi TIGR00159. TIGR00159. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence and analysis of a 31 kb segment of the Bacillus subtilis chromosome in the area of the rrnH and rrnG operons."
    Liu H., Haga K., Yasumoto K., Ohashi Y., Yoshikawa H., Takahashi H.
    Microbiology 143:2763-2767(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: 168.
  2. "The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
    Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V.
    , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
    Nature 390:249-256(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 168.
  3. "From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later."
    Barbe V., Cruveiller S., Kunst F., Lenoble P., Meurice G., Sekowska A., Vallenet D., Wang T., Moszer I., Medigue C., Danchin A.
    Microbiology 155:1758-1775(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: SEQUENCE REVISION TO 270.

Entry informationi

Entry nameiYBBP_BACSU
AccessioniPrimary (citable) accession number: Q45589
Secondary accession number(s): Q45590, Q7DL98
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 20, 2009
Last sequence update: June 16, 2009
Last modified: September 3, 2014
This is version 78 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList

External Data

Dasty 3

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