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Protein

Flagellin

Gene

flaB

Organism
Borrelia miyamotoi
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Component of the core of the flagella.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
FlagellinUniRule annotation
Gene namesi
Name:flaBImported
OrganismiBorrelia miyamotoiImported
Taxonomic identifieri47466 [NCBI]
Taxonomic lineageiBacteriaSpirochaetesSpirochaetalesBorreliaceaeBorrelia

Subcellular locationi

  • Periplasm UniRule annotation
  • Periplasmic flagellum UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Bacterial flagellumUniRule annotationSAAS annotation, Cell projection, Cilium, FlagellumImported, PeriplasmUniRule annotation

Structurei

3D structure databases

SMRiQ45565. Positions 55-137.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini3 – 139137Flagellin_D0/D1InterPro annotationAdd
BLAST
Domaini173 – 20432Flg_bb_rodInterPro annotationAdd
BLAST
Domaini249 – 33385Flagellin_D0/D1InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the bacterial flagellin family.UniRule annotationSAAS annotation

Family and domain databases

Gene3Di1.20.1330.10. 3 hits.
InterProiIPR001444. Flag_bb_rod_N.
IPR001492. Flagellin.
IPR001029. Flagellin_D0/D1.
[Graphical view]
PfamiPF00700. Flagellin_C. 1 hit.
PF00669. Flagellin_N. 1 hit.
PF00460. Flg_bb_rod. 1 hit.
[Graphical view]
PRINTSiPR00207. FLAGELLIN.

Sequencei

Sequence statusi: Complete.

Q45565-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIINHNTSAI NASRNNGINA ANLSKTQEKL SSGYRINRAS DDAAGMGVAG
60 70 80 90 100
KLNSQIRGLS QASRNTSKAI NFIQTTEGNL NEVEKVLVRM KELAVQSGNG
110 120 130 140 150
TYSDSDRGSI QIEIEQLTDE INRIADQAQY NQMHMLSNKS AAQNVKTAEE
160 170 180 190 200
LGMQPAKINT PASLAGSQAS WTLRVHVGAN QDEAIAVNIY AANVANLFNG
210 220 230 240 250
EGAQAAPAQE GAQQEGVQAV PAPAAAPVQG GVNSPINVTT AIDANMSLSK
260 270 280 290 300
IEDAIRMVTD QRANLGAFQN RLESVKASTD YAIENLKASY AQVKDAIMTD
310 320 330
EIVASTTNSI LTQSAMAMIA QANQVPQYVL SLLR
Length:334
Mass (Da):35,446
Last modified:November 1, 1996 - v1
Checksum:iB6345CDB5851728B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY604981 Genomic DNA. Translation: AAT99442.1.
D43777 Genomic DNA. Translation: BAA07832.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY604981 Genomic DNA. Translation: AAT99442.1.
D43777 Genomic DNA. Translation: BAA07832.1.

3D structure databases

SMRiQ45565. Positions 55-137.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di1.20.1330.10. 3 hits.
InterProiIPR001444. Flag_bb_rod_N.
IPR001492. Flagellin.
IPR001029. Flagellin_D0/D1.
[Graphical view]
PfamiPF00700. Flagellin_C. 1 hit.
PF00669. Flagellin_N. 1 hit.
PF00460. Flg_bb_rod. 1 hit.
[Graphical view]
PRINTSiPR00207. FLAGELLIN.
ProtoNetiSearch...

Publicationsi

  1. "The flagellin gene of Borrelia miyamotoi sp. nov. and its phylogenetic relationship among Borrelia species."
    Fukunaga M., Koreki Y.
    FEMS Microbiol. Lett. 134:255-258(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: HT31Imported.
  2. "Phylogenetic analysis of Borrelia species based on flagellin gene sequences and its application for molecular typing of Lyme disease borreliae."
    Fukunaga M., Okada K., Nakao M., Konishi T., Sato Y.
    Int. J. Syst. Bacteriol. 46:898-905(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: HT31Imported.
  3. "Variable tick protein in two genomic groups of the relapsing fever spirochete Borrelia hermsii in western North America."
    Porcella S.F., Raffel S.J., Anderson D.E. Jr, Gilk S.D., Bono J.L., Schrumpf M.E., Schwan T.G.
    Infect. Immun. 73:6647-6658(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: FR64bImported.

Entry informationi

Entry nameiQ45565_9SPIR
AccessioniPrimary (citable) accession number: Q45565
Secondary accession number(s): Q45315
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: June 8, 2016
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.