Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Ferredoxin 7Fe

Gene

fdxA

Organism
Bacillus schlegelii
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at protein leveli

Functioni

Cofactori

Protein has several cofactor binding sites:

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi9Iron-sulfur 1 (3Fe-4S)1
Metal bindingi17Iron-sulfur 1 (3Fe-4S)1
Metal bindingi21Iron-sulfur 2 (4Fe-4S)1
Metal bindingi40Iron-sulfur 2 (4Fe-4S)1
Metal bindingi43Iron-sulfur 2 (4Fe-4S)1
Metal bindingi46Iron-sulfur 2 (4Fe-4S)1
Metal bindingi50Iron-sulfur 1 (3Fe-4S)1

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Electron transport, Transport

Keywords - Ligandi

3Fe-4S, 4Fe-4S, Iron, Iron-sulfur, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Ferredoxin 7Fe
Alternative name(s):
Seven-iron ferredoxin
Gene namesi
Name:fdxA
OrganismiBacillus schlegelii
Taxonomic identifieri1484 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeHydrogenibacillus

Pathology & Biotechi

Mutagenesis

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Mutagenesisi14D → C: Transformation from a 7S to 8S ferredoxin. 1 Publication1

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemoved
ChainiPRO_00001591722 – 78Ferredoxin 7FeAdd BLAST77

Interactioni

Subunit structurei

Monomer.

Structurei

Secondary structure

178
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Turni8 – 11Combined sources4
Turni18 – 20Combined sources3
Beta strandi26 – 28Combined sources3
Beta strandi30 – 35Combined sources6
Turni37 – 39Combined sources3
Helixi46 – 49Combined sources4
Helixi51 – 53Combined sources3
Beta strandi54 – 57Combined sources4
Turni58 – 60Combined sources3
Helixi63 – 75Combined sources13

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1BC6NMR-A2-78[»]
1BD6NMR-A2-78[»]
1BQXNMR-A2-78[»]
1BWENMR-A2-78[»]
ProteinModelPortaliQ45560.
SMRiQ45560.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ45560.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini2 – 294Fe-4S ferredoxin-type 1PROSITE-ProRule annotationAdd BLAST28
Domaini31 – 604Fe-4S ferredoxin-type 2PROSITE-ProRule annotationAdd BLAST30

Sequence similaritiesi

Contains 2 4Fe-4S ferredoxin-type domains.PROSITE-ProRule annotation

Keywords - Domaini

Repeat

Family and domain databases

InterProiIPR017896. 4Fe4S_Fe-S-bd.
IPR017900. 4Fe4S_Fe_S_CS.
IPR000813. 7Fe_ferredoxin.
[Graphical view]
PfamiPF00037. Fer4. 1 hit.
[Graphical view]
PRINTSiPR00354. 7FE8SFRDOXIN.
PROSITEiPS00198. 4FE4S_FER_1. 1 hit.
PS51379. 4FE4S_FER_2. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q45560-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAYVITEPCI GTKDASCVEV CPVDCIHEGE DQYYIDPDVC IDCGACEAVC
60 70
PVSAIYHEDF VPEEWKSYIQ KNRDFFKK
Length:78
Mass (Da):8,874
Last modified:January 23, 2007 - v2
Checksum:i3295879B2E8C2BAA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D29804 Genomic DNA. Translation: BAA06187.1.
PIRiJC2496.
RefSeqiWP_066198812.1. NZ_JYFD01000154.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D29804 Genomic DNA. Translation: BAA06187.1.
PIRiJC2496.
RefSeqiWP_066198812.1. NZ_JYFD01000154.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1BC6NMR-A2-78[»]
1BD6NMR-A2-78[»]
1BQXNMR-A2-78[»]
1BWENMR-A2-78[»]
ProteinModelPortaliQ45560.
SMRiQ45560.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Miscellaneous databases

EvolutionaryTraceiQ45560.

Family and domain databases

InterProiIPR017896. 4Fe4S_Fe-S-bd.
IPR017900. 4Fe4S_Fe_S_CS.
IPR000813. 7Fe_ferredoxin.
[Graphical view]
PfamiPF00037. Fer4. 1 hit.
[Graphical view]
PRINTSiPR00354. 7FE8SFRDOXIN.
PROSITEiPS00198. 4FE4S_FER_1. 1 hit.
PS51379. 4FE4S_FER_2. 2 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiFER_BACSC
AccessioniPrimary (citable) accession number: Q45560
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: January 23, 2007
Last modified: November 30, 2016
This is version 92 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.