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Q45388 (TEX_BORPE) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 81. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Protein tex
Gene names
Name:tex
Ordered Locus Names:BP1144
OrganismBordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251) [Reference proteome] [HAMAP]
Taxonomic identifier257313 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesAlcaligenaceaeBordetella

Protein attributes

Sequence length791 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Function

Transcription accessory protein. Exact function not known.

Sequence similarities

Contains 1 S1 motif domain.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 791791Protein tex
PRO_0000215103

Regions

Domain670 – 73970S1 motif

Experimental info

Sequence conflict613 – 6175REALK → ARRSQ in CAA64672. Ref.1

Sequences

Sequence LengthMass (Da)Tools
Q45388 [UniParc].

Last modified September 19, 2003. Version 2.
Checksum: 04F6A8B6A6FC8714

FASTA79185,727
        10         20         30         40         50         60 
MPETSATTNA APGVDHARII AQLATEIGAR ASQVASAVEL LDDGATVPFI ARYRKEATGG 

        70         80         90        100        110        120 
LDDGALRTLE VRLGYLRELE ERRGAILESI TQQGKLTPEL QQEIATAETK QRLEDLYAPY 

       130        140        150        160        170        180 
KPKRRTRAQI AREAGLEPLA DAILADPACD PAALAAQYLN PEASINDAKA ALDGARDILA 

       190        200        210        220        230        240 
ERHAENADLL ADIREHLWST GLLYSKMVEG KETDGANFRD WFDFNEPLRT LPSHRILALM 

       250        260        270        280        290        300 
RGRQQGVLEL RVGLEADLEA ETPHPCVVRI ASFLKLGNGL FALDATPRAR WLGEVCRWTW 

       310        320        330        340        350        360 
RVKLLTAFES ELFGRLRESA EAEAIRVFAA NLKDLLLAAP AGPKTVLGLD PGIRTGCKVA 

       370        380        390        400        410        420 
VIDRTGKVVD TATVYPFEPR RDREGTIKTL AALAARHKVE LIAIGNGTAS RESEKLVGDM 

       430        440        450        460        470        480 
MARFPDLALT RVVVSEAGAS VYSASETAAL EFPDLDVTLR GAVSIARRLQ DPLAELVKID 

       490        500        510        520        530        540 
PKAIGVGQYQ HDVNQRELAR SLDAVVEDCV NAVGVDVNTA SAALLARVSG LNTLLAKNIV 

       550        560        570        580        590        600 
AWRDENGAFP TRDMLRKVPR FGEKAFEQAA GFLRIPNGDN PLDASAVHPE AYPVVERIVA 

       610        620        630        640        650        660 
RIKADVRHII GQREALKGVS PSDFTDERFG LPTVRDIFAE LEKPGRDPRP EFKTAQFKEG 

       670        680        690        700        710        720 
VETLNDLFPG MVLEGVVTNV ANFGAFVDIG VHQDGLVHIS ALAEKFVKDP RDVVRVGQTV 

       730        740        750        760        770        780 
TVKVLEVDVA RKRVALTMRL NDAAEPARRG NGAGAGAARG ADRGARRPQA DNGKGAPANS 

       790 
AMADAFAKLK R 

« Hide

References

« Hide 'large scale' references
[1]"A new gene locus of Bordetella pertussis defines a novel family of prokaryotic transcriptional accessory proteins."
Fuchs T.M., Deppisch H., Scarlato V., Gross R.
J. Bacteriol. 178:4445-4452(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: Tohama I / ATCC BAA-589 / NCTC 13251.
[2]"Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica."
Parkhill J., Sebaihia M., Preston A., Murphy L.D., Thomson N.R., Harris D.E., Holden M.T.G., Churcher C.M., Bentley S.D., Mungall K.L., Cerdeno-Tarraga A.-M., Temple L., James K.D., Harris B., Quail M.A., Achtman M., Atkin R., Baker S. expand/collapse author list , Basham D., Bason N., Cherevach I., Chillingworth T., Collins M., Cronin A., Davis P., Doggett J., Feltwell T., Goble A., Hamlin N., Hauser H., Holroyd S., Jagels K., Leather S., Moule S., Norberczak H., O'Neil S., Ormond D., Price C., Rabbinowitsch E., Rutter S., Sanders M., Saunders D., Seeger K., Sharp S., Simmonds M., Skelton J., Squares R., Squares S., Stevens K., Unwin L., Whitehead S., Barrell B.G., Maskell D.J.
Nat. Genet. 35:32-40(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Tohama I / ATCC BAA-589 / NCTC 13251.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
X95386 Genomic DNA. Translation: CAA64672.1.
BX640414 Genomic DNA. Translation: CAE41441.1.
RefSeqNP_879920.1. NC_002929.2.

3D structure databases

ProteinModelPortalQ45388.
SMRQ45388. Positions 16-742.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING257313.BP1144.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAE41441; CAE41441; BP1144.
GeneID2667413.
KEGGbpe:BP1144.
PATRIC21155458. VBIBorPer7866_1228.

Phylogenomic databases

eggNOGCOG2183.
HOGENOMHOG000270497.
KOK06959.
OMAWADTESI.
OrthoDBEOG6WT8CC.

Enzyme and pathway databases

BioCycBPER257313:BP1144-MONOMER.

Family and domain databases

Gene3D1.10.10.650. 1 hit.
1.10.150.310. 1 hit.
1.10.3500.10. 2 hits.
2.40.50.140. 1 hit.
3.30.420.140. 1 hit.
InterProIPR012340. NA-bd_OB-fold.
IPR003029. Rbsml_prot_S1_RNA-bd_dom.
IPR022967. RNA-binding_domain_S1.
IPR012337. RNaseH-like_dom.
IPR010994. RuvA_2-like.
IPR023323. Tex-like_dom.
IPR023319. Tex-like_HTH_dom.
IPR018974. Tex-like_N.
IPR023097. Tex_RuvX-like_dom.
IPR006641. YqgF/RNaseH-like_dom.
[Graphical view]
PfamPF00575. S1. 1 hit.
PF09371. Tex_N. 1 hit.
[Graphical view]
SMARTSM00316. S1. 1 hit.
SM00732. YqgFc. 1 hit.
[Graphical view]
SUPFAMSSF47781. SSF47781. 2 hits.
SSF50249. SSF50249. 1 hit.
SSF53098. SSF53098. 1 hit.
PROSITEPS50126. S1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameTEX_BORPE
AccessionPrimary (citable) accession number: Q45388
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: September 19, 2003
Last modified: May 14, 2014
This is version 81 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families