Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

HupT

Gene

hupT

Organism
Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium radiobacter)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

DNA-bindingSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
HupTImported
Gene namesi
Name:hupTImported
Encoded oniPlasmid TiImported
OrganismiRhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium radiobacter)Imported
Taxonomic identifieri358 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupAgrobacteriumAgrobacterium tumefaciens complex

Structurei

3D structure databases

ProteinModelPortaliQ44357.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the bacterial histone-like protein family.UniRule annotationSAAS annotation

Phylogenomic databases

KOiK03530.

Family and domain databases

Gene3Di4.10.520.10. 1 hit.
InterProiIPR000119. Hist_DNA-bd.
IPR010992. IHF-like_DNA-bd_dom.
[Graphical view]
PfamiPF00216. Bac_DNA_binding. 1 hit.
[Graphical view]
PRINTSiPR01727. DNABINDINGHU.
SMARTiSM00411. BHL. 1 hit.
[Graphical view]
SUPFAMiSSF47729. SSF47729. 1 hit.

Sequencei

Sequence statusi: Complete.

Q44357-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTTTNEIADK IAAEQNLTKA QAKTIVESVF KQITDAALAG AETSIPSFGK
60 70 80 90
FKLKDTPERE GRNPATGATI KIAASKKLTF TLGKAVKDAL NG
Length:92
Mass (Da):9,694
Last modified:November 1, 1996 - v1
Checksum:i5B8DD9093431976E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF242881 Genomic DNA. Translation: AAC28112.1.
RefSeqiNP_059689.1. NC_002377.1.
WP_010892377.1. NZ_CP011249.1.

Genome annotation databases

GeneIDi1224208.
KEGGiatf:Ach5_51360.
pg:1224208.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF242881 Genomic DNA. Translation: AAC28112.1.
RefSeqiNP_059689.1. NC_002377.1.
WP_010892377.1. NZ_CP011249.1.

3D structure databases

ProteinModelPortaliQ44357.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi1224208.
KEGGiatf:Ach5_51360.
pg:1224208.

Phylogenomic databases

KOiK03530.

Family and domain databases

Gene3Di4.10.520.10. 1 hit.
InterProiIPR000119. Hist_DNA-bd.
IPR010992. IHF-like_DNA-bd_dom.
[Graphical view]
PfamiPF00216. Bac_DNA_binding. 1 hit.
[Graphical view]
PRINTSiPR01727. DNABINDINGHU.
SMARTiSM00411. BHL. 1 hit.
[Graphical view]
SUPFAMiSSF47729. SSF47729. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The conjugal transfer system of Agrobacterium tumefaciens octopine-type Ti plasmids is closely related to the transfer system of an IncP plasmid and distantly related to Ti plasmid vir genes."
    Alt-Morbe J., Stryker J.L., Fuqua C., Li P.L., Farrand S.K., Winans S.C.
    J. Bacteriol. 178:4248-4257(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Plasmid: Ti
  2. "Octopine-type Ti plasmid sequence."
    Winans S.C., Zhu J., Oger P.M., Schrammeijer B., Hooykaas P.J., Farrand S.K.
    Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Plasmid: Ti

Entry informationi

Entry nameiQ44357_RHIRD
AccessioniPrimary (citable) accession number: Q44357
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: May 11, 2016
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

PlasmidImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.