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Protein
Submitted name:

Regulatory protein

Gene

merR

Organism
Alcaligenes faecalis
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

DNA-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Regulatory proteinImported
Gene namesi
Name:merRImported
OrganismiAlcaligenes faecalisImported
Taxonomic identifieri511 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesAlcaligenaceaeAlcaligenes

Structurei

3D structure databases

ProteinModelPortaliQ44190.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini7 – 76HTH merR-type DNA-bindingInterPro annotationAdd BLAST70

Sequence similaritiesi

Contains 1 HTH merR-type DNA-binding domain.UniRule annotation

Family and domain databases

CDDicd04783. HTH_MerR1. 1 hit.
InterProiIPR009061. DNA-bd_dom_put.
IPR011794. MerR.
IPR000551. MerR-type_HTH_dom.
IPR015358. Tscrpt_reg_MerR_DNA-bd.
[Graphical view]
PfamiPF00376. MerR. 1 hit.
PF09278. MerR-DNA-bind. 1 hit.
[Graphical view]
PRINTSiPR00040. HTHMERR.
SMARTiSM00422. HTH_MERR. 1 hit.
[Graphical view]
SUPFAMiSSF46955. SSF46955. 1 hit.
TIGRFAMsiTIGR02051. MerR. 1 hit.
PROSITEiPS00552. HTH_MERR_1. 1 hit.
PS50937. HTH_MERR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q44190-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MENNLENLTI GVFAKAAGVN VETIRFYQRK GLLPEPDKPY GSIRRYGEAD
60 70 80 90 100
VVRVKFVKSA QRLGFSLDEI AELLRLDDGT HCEEASSLAE HKLKDVREKM
110 120 130 140
ADLARMETVL SELVCACHAR KGNVSCPLIA SLQGEGGLAR SAMP
Length:144
Mass (Da):15,832
Last modified:November 1, 1996 - v1
Checksum:iB71D7FF3C980DC49
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z33484 Genomic DNA. Translation: CAA83892.1.
PIRiS51706.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z33484 Genomic DNA. Translation: CAA83892.1.
PIRiS51706.

3D structure databases

ProteinModelPortaliQ44190.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

CDDicd04783. HTH_MerR1. 1 hit.
InterProiIPR009061. DNA-bd_dom_put.
IPR011794. MerR.
IPR000551. MerR-type_HTH_dom.
IPR015358. Tscrpt_reg_MerR_DNA-bd.
[Graphical view]
PfamiPF00376. MerR. 1 hit.
PF09278. MerR-DNA-bind. 1 hit.
[Graphical view]
PRINTSiPR00040. HTHMERR.
SMARTiSM00422. HTH_MERR. 1 hit.
[Graphical view]
SUPFAMiSSF46955. SSF46955. 1 hit.
TIGRFAMsiTIGR02051. MerR. 1 hit.
PROSITEiPS00552. HTH_MERR_1. 1 hit.
PS50937. HTH_MERR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ44190_ALCFA
AccessioniPrimary (citable) accession number: Q44190
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: October 5, 2016
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.