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Protein
Submitted name:

ORF134

Gene

rbcX

Organism
Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum quadruplicatum)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi48 – 481Zinc; via tele nitrogenCombined sources
Metal bindingi63 – 631ZincCombined sources

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

Metal-bindingCombined sources, ZincCombined sources

Enzyme and pathway databases

BioCyciSSP32049:GKF7-1798-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ORF134Imported
Submitted name:
RbcX protein, possible rubisco chaperoneImported
Gene namesi
Name:rbcXImported
Ordered Locus Names:SYNPCC7002_A1797Imported
OrganismiSynechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum quadruplicatum)Imported
Taxonomic identifieri32049 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
Proteomesi
  • UP000001688 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi32049.SYNPCC7002_A1797.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2PEIX-ray2.70A/B/C/D/E/F/G/H/I/J/K/L1-109[»]
2PEJX-ray3.40A/B/C/D/E/F1-134[»]
2PEKX-ray3.10A/B/C/D/E/F1-134[»]
2PEMX-ray2.95A/B/C/D/E/F1-134[»]
2PENX-ray2.80A/B/C/D/E/F1-134[»]
2PEQX-ray1.90A/B1-134[»]
2Z44X-ray2.50A1-134[»]
2Z45X-ray2.15A/B1-134[»]
2Z46X-ray2.97A/B/C/D/E/F1-134[»]
SMRiQ44177. Positions 3-114.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4105MRI. Bacteria.
ENOG4111VPF. LUCA.
HOGENOMiHOG000246928.
OMAiISYLTYQ.
OrthoDBiEOG6HB9R2.

Family and domain databases

InterProiIPR003435. Chaperonin_RcbX.
[Graphical view]
PfamiPF02341. RcbX. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q44177-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEFKKVAKET AITLQSYLTY QAVRLISQQL SETNPGQAIW LGEFSKRHPI
60 70 80 90 100
QESDLYLEAM MLENKELVLR ILTVRENLAE GVLEFLPEMV LSQIKQSNGN
110 120 130
HRRSLLERLT QVDSSSTDQT EPNPGESDTS EDSE
Length:134
Mass (Da):15,269
Last modified:November 1, 1996 - v1
Checksum:iA11F42E96F424988
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000951 Genomic DNA. Translation: ACA99785.1.
D13971 Genomic DNA. Translation: BAA03077.1.
RefSeqiWP_012307408.1. NC_010475.1.

Genome annotation databases

EnsemblBacteriaiACA99785; ACA99785; SYNPCC7002_A1797.
KEGGisyp:SYNPCC7002_A1797.
PATRICi23818224. VBISynSp37135_2053.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000951 Genomic DNA. Translation: ACA99785.1.
D13971 Genomic DNA. Translation: BAA03077.1.
RefSeqiWP_012307408.1. NC_010475.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2PEIX-ray2.70A/B/C/D/E/F/G/H/I/J/K/L1-109[»]
2PEJX-ray3.40A/B/C/D/E/F1-134[»]
2PEKX-ray3.10A/B/C/D/E/F1-134[»]
2PEMX-ray2.95A/B/C/D/E/F1-134[»]
2PENX-ray2.80A/B/C/D/E/F1-134[»]
2PEQX-ray1.90A/B1-134[»]
2Z44X-ray2.50A1-134[»]
2Z45X-ray2.15A/B1-134[»]
2Z46X-ray2.97A/B/C/D/E/F1-134[»]
SMRiQ44177. Positions 3-114.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi32049.SYNPCC7002_A1797.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACA99785; ACA99785; SYNPCC7002_A1797.
KEGGisyp:SYNPCC7002_A1797.
PATRICi23818224. VBISynSp37135_2053.

Phylogenomic databases

eggNOGiENOG4105MRI. Bacteria.
ENOG4111VPF. LUCA.
HOGENOMiHOG000246928.
OMAiISYLTYQ.
OrthoDBiEOG6HB9R2.

Enzyme and pathway databases

BioCyciSSP32049:GKF7-1798-MONOMER.

Family and domain databases

InterProiIPR003435. Chaperonin_RcbX.
[Graphical view]
PfamiPF02341. RcbX. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Cloning and characterization of RubisCO large subunit and small subunit from Synechococcus sp. PCC7002."
    Akiyama H., Kanai S., Hirano M., Sugimoto M., Kiyohara M.
    Submitted (DEC-1992) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: PCC 7002Imported.
  2. "Structure and function of RbcX, an assembly chaperone for hexadecameric Rubisco."
    Saschenbrecker S., Bracher A., Rao K.V., Rao B.V., Hartl F.U., Hayer-Hartl M.
    Cell 129:1189-1200(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.90 ANGSTROMS).
  3. "Crystal Structure of ORF134."
    Tomimoto Y., Ihara K., Onizuka T., Kanai S., Ashida H., Yokota A., Tanaka S., Miyasaka H., Yamada Y., Kato R., Wakatsuki S.
    Submitted (JUN-2007) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (2.50 ANGSTROMS), X-RAY CRYSTALLOGRAPHY (2.15 ANGSTROMS) IN COMPLEX WITH ZINC, X-RAY CRYSTALLOGRAPHY (2.97 ANGSTROMS).
  4. "Complete sequence of Synechococcus sp. PCC 7002."
    Li T., Zhao J., Zhao C., Liu Z., Zhao F., Marquardt J., Nomura C.T., Persson S., Detter J.C., Richardson P.M., Lanz C., Schuster S.C., Wang J., Li S., Huang X., Cai T., Yu Z., Luo J., Zhao J., Bryant D.A.
    Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27264 / PCC 7002 / PR-6Imported.
  5. Vijaykrishna D., Smith G., Guan Y., Peiris J.
    Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: PCC 7002Imported.

Entry informationi

Entry nameiQ44177_SYNP2
AccessioniPrimary (citable) accession number: Q44177
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: April 13, 2016
This is version 82 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.