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Protein

Endo-1,4-beta-xylanase

Gene

xynA

Organism
Aeromonas caviae (Aeromonas punctata)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-beta-D-xylosidic linkages in xylans.UniRule annotation

Pathwayi: xylan degradation

This protein is involved in the pathway xylan degradation, which is part of Glycan degradation.UniRule annotation
View all proteins of this organism that are known to be involved in the pathway xylan degradation and in Glycan degradation.

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolism, Polysaccharide degradation, Xylan degradationUniRule annotationImported

Enzyme and pathway databases

UniPathwayiUPA00114.

Protein family/group databases

CAZyiGH11. Glycoside Hydrolase Family 11.
mycoCLAPiXYN11A_AERCA.

Names & Taxonomyi

Protein namesi
Recommended name:
Endo-1,4-beta-xylanaseUniRule annotation (EC:3.2.1.8UniRule annotation)
Gene namesi
Name:xynAImported
OrganismiAeromonas caviae (Aeromonas punctata)Imported
Taxonomic identifieri648 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAeromonadalesAeromonadaceaeAeromonas

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2323Sequence analysisAdd
BLAST
Chaini24 – 211188Endo-1,4-beta-xylanaseSequence analysisPRO_5004231939Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliQ43993.
SMRiQ43993. Positions 25-211.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini19 – 211193GH11 (glycosyl hydrolase family 11)InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the glycosyl hydrolase 11 (cellulase G) family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Family and domain databases

Gene3Di2.60.120.180. 1 hit.
InterProiIPR013320. ConA-like_dom.
IPR013319. GH11/12.
IPR018208. GH11_AS_1.
IPR033119. GH11_AS_2.
IPR033123. GH11_dom.
IPR001137. Glyco_hydro_11.
[Graphical view]
PfamiPF00457. Glyco_hydro_11. 1 hit.
[Graphical view]
PRINTSiPR00911. GLHYDRLASE11.
SUPFAMiSSF49899. SSF49899. 1 hit.
PROSITEiPS00776. GH11_1. 1 hit.
PS00777. GH11_2. 1 hit.
PS51761. GH11_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q43993-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFKFGKKLMT VVLAASMSFG VFAATSSAAT DYWQNWTDGG GTVNAVNGSG
60 70 80 90 100
GNYSVSWQNT GNFVVGKGWT YGTPNRVVNY NAGVFAPSGN GYLTFYGWTR
110 120 130 140 150
NALIEYYVVD SWGTYRPTGT YKGTVNSDGG TYDIYTTMRY NAPSIDGTQT
160 170 180 190 200
FPQYWSVRQS KRPTGVNSTI TFSNHVNAWP SKGMYLGNSW SYQVMATEGY
210
QSSGNANVTV W
Length:211
Mass (Da):23,136
Last modified:November 1, 1996 - v1
Checksum:iF9E30403EB935E49
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D32065 Genomic DNA. Translation: BAA06837.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D32065 Genomic DNA. Translation: BAA06837.1.

3D structure databases

ProteinModelPortaliQ43993.
SMRiQ43993. Positions 25-211.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiGH11. Glycoside Hydrolase Family 11.
mycoCLAPiXYN11A_AERCA.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Enzyme and pathway databases

UniPathwayiUPA00114.

Family and domain databases

Gene3Di2.60.120.180. 1 hit.
InterProiIPR013320. ConA-like_dom.
IPR013319. GH11/12.
IPR018208. GH11_AS_1.
IPR033119. GH11_AS_2.
IPR033123. GH11_dom.
IPR001137. Glyco_hydro_11.
[Graphical view]
PfamiPF00457. Glyco_hydro_11. 1 hit.
[Graphical view]
PRINTSiPR00911. GLHYDRLASE11.
SUPFAMiSSF49899. SSF49899. 1 hit.
PROSITEiPS00776. GH11_1. 1 hit.
PS00777. GH11_2. 1 hit.
PS51761. GH11_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Xylanase I of Aeromonas caviae ME-1 isolated from the intestine of a herbivorous insect(Samia cynthia pryeri)."
    Kubata K.B., Suzuki T., Horitsu H., Kawai K., Takamizawa K.
    Biosci. Biotechnol. Biochem. 56:1463-1464(1992)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ME-1Imported.
    Tissue: Gut content of silk wormImported.
  2. "Molecular cloning of the xynA gene encoding an endo-xylanae (xylanase I) of Aeromonas caviae ME-1."
    Suzuki T., Itoh Y., Naito H., Kubata K.B., Horitsu H., Takamizawa K., Kawai K.
    Submitted (JUL-1994) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ME-1Imported.
    Tissue: Gut content of silk wormImported.

Entry informationi

Entry nameiQ43993_AERCA
AccessioniPrimary (citable) accession number: Q43993
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: June 8, 2016
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.