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Protein
Submitted name:

Chitinase

Gene

pHS2

Organism
Ulmus americana (American elm)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidaseImported, Hydrolase
LigandChitin-bindingPROSITE-ProRule annotationSAAS annotation

Protein family/group databases

CAZyiCBM18. Carbohydrate-Binding Module Family 18.
GH19. Glycoside Hydrolase Family 19.

Names & Taxonomyi

Protein namesi
Submitted name:
ChitinaseImported (EC:3.2.1.14Imported)
Gene namesi
Name:pHS2Imported
Synonyms:CHTImported
OrganismiUlmus americana (American elm)Imported
Taxonomic identifieri29740 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsRosalesUlmaceaeUlmus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 21Sequence analysisAdd BLAST21
ChainiPRO_500770269022 – 321Sequence analysisAdd BLAST300

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi24 ↔ 39UniRule annotation
Disulfide bondi33 ↔ 45UniRule annotation
Disulfide bondi38 ↔ 52UniRule annotation
Disulfide bondi56 ↔ 60UniRule annotation
Disulfide bondi167 ↔ 175UniRule annotation
Disulfide bondi274 ↔ 306UniRule annotation

Keywords - PTMi

Disulfide bondUniRule annotationSAAS annotation

Proteomic databases

PRIDEiQ43853.

Structurei

3D structure databases

ProteinModelPortaliQ43853.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini21 – 62Chitin-binding type-1InterPro annotationAdd BLAST42

Sequence similaritiesi

Belongs to the glycosyl hydrolase 19 family.SAAS annotation

Keywords - Domaini

SignalSequence analysis

Family and domain databases

CDDicd00325. chitinase_glyco_hydro_19. 1 hit.
Gene3Di3.30.60.10. 1 hit.
InterProiView protein in InterPro
IPR001002. Chitin-bd_1.
IPR018371. Chitin-binding_1_CS.
IPR016283. Glyco_hydro_19.
IPR000726. Glyco_hydro_19_cat.
IPR023346. Lysozyme-like_dom.
PfamiView protein in Pfam
PF00187. Chitin_bind_1. 1 hit.
PF00182. Glyco_hydro_19. 1 hit.
PIRSFiPIRSF001060. Endochitinase. 1 hit.
PRINTSiPR00451. CHITINBINDNG.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD000609. Chitin_bd_1. 1 hit.
SMARTiView protein in SMART
SM00270. ChtBD1. 1 hit.
SUPFAMiSSF53955. SSF53955. 1 hit.
SSF57016. SSF57016. 1 hit.
PROSITEiView protein in PROSITE
PS00026. CHIT_BIND_I_1. 1 hit.
PS50941. CHIT_BIND_I_2. 1 hit.
PS00774. CHITINASE_19_2. 1 hit.

Sequencei

Sequence statusi: Complete.

Q43853-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRFWALTTLS LLLSIIQGGW AEQCGSQAGG AVCPVGLCCS KFGWCGSTNE
60 70 80 90 100
YCGDGCQSQC GGTGRGDIGG LISSSAFNDM LKHRNDRWFP AKGFYTYDAF
110 120 130 140 150
ISGLSKAFPC NLRTTGDDIT RKREIAAFLG QTSHETTGGW ASAPRGPITL
160 170 180 190 200
GGYCYNREPK TLLLDYCSFS PTWPCASGKR YFGRGPIQLS WNYNYGQCGR
210 220 230 240 250
RIGANLLNNP DLVATDPVIS FKTALWFWMT PQSPKPSCHD VITGRWSPSG
260 270 280 290 300
TDQSAGRVAG YGVITNIING GIECGKGQVP QVVERIGFYK RYCDILIVGY
310 320
GNNLDCYNQR PFGNGLLLDT M
Length:321
Mass (Da):34,951
Last modified:November 1, 1996 - v1
Checksum:iC7FEFF2FEE313C51
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L22032 mRNA. Translation: AAA34214.1.
DQ078281 mRNA. Translation: AAY82487.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L22032 mRNA. Translation: AAA34214.1.
DQ078281 mRNA. Translation: AAY82487.1.

3D structure databases

ProteinModelPortaliQ43853.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiCBM18. Carbohydrate-Binding Module Family 18.
GH19. Glycoside Hydrolase Family 19.

Proteomic databases

PRIDEiQ43853.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

CDDicd00325. chitinase_glyco_hydro_19. 1 hit.
Gene3Di3.30.60.10. 1 hit.
InterProiView protein in InterPro
IPR001002. Chitin-bd_1.
IPR018371. Chitin-binding_1_CS.
IPR016283. Glyco_hydro_19.
IPR000726. Glyco_hydro_19_cat.
IPR023346. Lysozyme-like_dom.
PfamiView protein in Pfam
PF00187. Chitin_bind_1. 1 hit.
PF00182. Glyco_hydro_19. 1 hit.
PIRSFiPIRSF001060. Endochitinase. 1 hit.
PRINTSiPR00451. CHITINBINDNG.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD000609. Chitin_bd_1. 1 hit.
SMARTiView protein in SMART
SM00270. ChtBD1. 1 hit.
SUPFAMiSSF53955. SSF53955. 1 hit.
SSF57016. SSF57016. 1 hit.
PROSITEiView protein in PROSITE
PS00026. CHIT_BIND_I_1. 1 hit.
PS50941. CHIT_BIND_I_2. 1 hit.
PS00774. CHITINASE_19_2. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ43853_ULMAM
AccessioniPrimary (citable) accession number: Q43853
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: April 12, 2017
This is version 88 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.