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Protein
Submitted name:

PF1 protein

Gene

PF1

Organism
Oryza sativa (Rice)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
PF1 proteinImported
Gene namesi
Name:PF1Imported
OrganismiOryza sativa (Rice)Imported
Taxonomic identifieri4530 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

PTM databases

iPTMnetiQ43600

Expressioni

Gene expression databases

ExpressionAtlasiQ43600 differential

Structurei

3D structure databases

ProteinModelPortaliQ43600
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini21 – 92H15InterPro annotationAdd BLAST72

Phylogenomic databases

eggNOGiENOG410JEJ4 Eukaryota
ENOG410YQM8 LUCA
HOGENOMiHOG000005795

Family and domain databases

Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR017956 AT_hook_DNA-bd_motif
IPR005818 Histone_H1/H5_H15
IPR000116 HMGA
IPR031059 HMGA_plant
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
PANTHERiPTHR11467:SF29 PTHR11467:SF29, 1 hit
PfamiView protein in Pfam
PF00538 Linker_histone, 1 hit
PRINTSiPR00929 ATHOOK
PR00930 HIGHMOBLTYIY
SMARTiView protein in SMART
SM00384 AT_hook, 4 hits
SM00526 H15, 1 hit
SUPFAMiSSF46785 SSF46785, 1 hit
PROSITEiView protein in PROSITE
PS51504 H15, 1 hit

Sequencei

Sequence statusi: Complete.

Q43600-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATEEDASTM AAAEADPKPA ATPSYPEMIL AAIEALDDRN GSNKTAISQH
60 70 80 90 100
IEGKYEGLLP PAHPSLLTAH LARMKQTGEL AFSKNNYFRG DDPSLPPKRG
110 120 130 140 150
RGRPPKPKDA AAAAAAPAPA PAAPAASSPR PRGRPPKPKD PLAEAVAKAT
160 170 180 190 200
SGMPRARGRP PKKAKVEQED PIGAPAAASA PAAAAEAAPP VKRGRGRPPK
210
VRPAAPVGEP AAA
Length:213
Mass (Da):21,753
Last modified:November 1, 1996 - v1
Checksum:iE51FFA28F5D5FB61
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L24390 mRNA Translation: AAA33914.1
PIRiT03931

Genome annotation databases

EnsemblPlantsiOs09t0402100-01; Os09t0402100-01; Os09g0402100
GrameneiOs09t0402100-01; Os09t0402100-01; Os09g0402100

Similar proteinsi

Entry informationi

Entry nameiQ43600_ORYSA
AccessioniPrimary (citable) accession number: Q43600
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: May 23, 2018
This is version 107 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health