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Protein
Submitted name:

PF1 protein

Gene

PF1

Organism
Oryza sativa (Rice)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
PF1 proteinImported
Gene namesi
Name:PF1Imported
OrganismiOryza sativa (Rice)Imported
Taxonomic identifieri4530 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

PTM databases

iPTMnetiQ43600.

Structurei

3D structure databases

ProteinModelPortaliQ43600.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini21 – 92H15InterPro annotationAdd BLAST72

Phylogenomic databases

eggNOGiENOG410JEJ4. Eukaryota.
ENOG410YQM8. LUCA.
HOGENOMiHOG000005795.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiView protein in InterPro
IPR017956. AT_hook_DNA-bd_motif.
IPR005818. Histone_H1/H5_H15.
IPR000116. HMGA.
IPR031059. HMGA_plant.
IPR011991. WHTH_DNA-bd_dom.
PANTHERiPTHR11467:SF79. PTHR11467:SF79. 1 hit.
PfamiView protein in Pfam
PF00538. Linker_histone. 1 hit.
PRINTSiPR00929. ATHOOK.
PR00930. HIGHMOBLTYIY.
SMARTiView protein in SMART
SM00384. AT_hook. 4 hits.
SM00526. H15. 1 hit.
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiView protein in PROSITE
PS51504. H15. 1 hit.

Sequencei

Sequence statusi: Complete.

Q43600-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATEEDASTM AAAEADPKPA ATPSYPEMIL AAIEALDDRN GSNKTAISQH
60 70 80 90 100
IEGKYEGLLP PAHPSLLTAH LARMKQTGEL AFSKNNYFRG DDPSLPPKRG
110 120 130 140 150
RGRPPKPKDA AAAAAAPAPA PAAPAASSPR PRGRPPKPKD PLAEAVAKAT
160 170 180 190 200
SGMPRARGRP PKKAKVEQED PIGAPAAASA PAAAAEAAPP VKRGRGRPPK
210
VRPAAPVGEP AAA
Length:213
Mass (Da):21,753
Last modified:November 1, 1996 - v1
Checksum:iE51FFA28F5D5FB61
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L24390 mRNA. Translation: AAA33914.1.
PIRiT03931.

Similar proteinsi

Entry informationi

Entry nameiQ43600_ORYSA
AccessioniPrimary (citable) accession number: Q43600
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: September 27, 2017
This is version 102 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)