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Protein

Class-10 pathogenesis-related protein 1

Gene

MSPR10-1

Organism
Medicago sativa (Alfalfa)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Pathogenesis-related protein

Keywords - Biological processi

Plant defense

Names & Taxonomyi

Protein namesi
Recommended name:
Class-10 pathogenesis-related protein 1
Alternative name(s):
MSPR10-1
Gene namesi
Name:MSPR10-1
OrganismiMedicago sativa (Alfalfa)
Taxonomic identifieri3879 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsFabalesFabaceaePapilionoideaeTrifolieaeMedicago

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001542001 – 157Class-10 pathogenesis-related protein 1Add BLAST157

Proteomic databases

PRIDEiQ43560.

Expressioni

Tissue specificityi

High levels in roots and not detectable in hypocotyls, cotyledons, stems, leaves and flower buds of untreated plants. After induction, high levels are present in the vascular bundles of leaves.

Developmental stagei

It appears in leaves 3 hours after induction, maximum levels are reached by 24 hours and remain at a high level over a period of at least 72 hours.

Inductioni

Upon contact with the plant pathogen Pseudomonas syringae pv pisi and salicylic acid.

Structurei

3D structure databases

ProteinModelPortaliQ43560.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the BetVI family.Curated

Family and domain databases

Gene3Di3.30.530.20. 1 hit.
InterProiIPR000916. Bet_v_I/MLP.
IPR024949. Bet_v_I_allergen.
IPR023393. START-like_dom.
[Graphical view]
PfamiPF00407. Bet_v_1. 1 hit.
[Graphical view]
PRINTSiPR00634. BETALLERGEN.
PROSITEiPS00451. PATHOGENESIS_BETVI. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q43560-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGVFNFEDET TSIVAPARLY KALVTDSDNL IPKVIDAIQS IEIVEGNGGA
60 70 80 90 100
GTIKKLTFVE GGETKYDLHK VDLVDDVNFA YNYSIVGGGG LPDTVEKISF
110 120 130 140 150
ESKLSAGPDG GSTAKLTVKY FTKGDAAPSE EEIKGGKARG DGLFKALEGY

VLANPDY
Length:157
Mass (Da):16,645
Last modified:November 1, 1996 - v1
Checksum:i635E986EF0BC4BFC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X98867 mRNA. Translation: CAA67375.1.
PIRiT09659.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X98867 mRNA. Translation: CAA67375.1.
PIRiT09659.

3D structure databases

ProteinModelPortaliQ43560.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiQ43560.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di3.30.530.20. 1 hit.
InterProiIPR000916. Bet_v_I/MLP.
IPR024949. Bet_v_I_allergen.
IPR023393. START-like_dom.
[Graphical view]
PfamiPF00407. Bet_v_1. 1 hit.
[Graphical view]
PRINTSiPR00634. BETALLERGEN.
PROSITEiPS00451. PATHOGENESIS_BETVI. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiPR1_MEDSA
AccessioniPrimary (citable) accession number: Q43560
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: November 1, 1996
Last modified: October 5, 2016
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.