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Protein

Protein 108

Gene
N/A
Organism
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Protein 108
OrganismiSolanum lycopersicum (Tomato) (Lycopersicon esculentum)
Taxonomic identifieri4081 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeSolanoideaeSolaneaeSolanumLycopersicon
ProteomesiUP000004994: Chromosome 1

Subcellular locationi

Secreted Curated

GO - Cellular componenti

  1. extracellular region Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3030Sequence AnalysisAdd
BLAST
Chaini31 – 10272Protein 108PRO_0000000238Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi41 ↔ 77By similarity
Disulfide bondi51 ↔ 66By similarity
Disulfide bondi67 ↔ 92By similarity
Disulfide bondi79 ↔ 99By similarity

Keywords - PTMi

Disulfide bond

Expressioni

Tissue specificityi

Stamen- and tapetum-specific.

Family & Domainsi

Sequence similaritiesi

Belongs to the A9/FIL1 family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

InParanoidiQ43495.
OMAiTASTECC.

Family and domain databases

InterProiIPR016140. Bifunc_inhib/LTP/seed_store.
[Graphical view]
SMARTiSM00499. AAI. 1 hit.
[Graphical view]
SUPFAMiSSF47699. SSF47699. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q43495-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASVKSSSSS SSSSFISLLL LILLVIVLQS QVIECQPQQS CTASLTGLNV
60 70 80 90 100
CAPFLVPGSP TASTECCNAV QSINHDCMCN TMRIAAQIPA QCNLPPLSCS

AN
Length:102
Mass (Da):10,576
Last modified:November 1, 1996 - v1
Checksum:iCFBAA1231C3A5E92
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z14088 mRNA. Translation: CAA78466.1.
PIRiS26409.
RefSeqiXP_004228450.1. XM_004228402.2.
UniGeneiLes.3896.

Genome annotation databases

EnsemblPlantsiSolyc01g009590.2.1; Solyc01g009590.2.1; Solyc01g009590.2.
GeneIDi544145.
KEGGisly:544145.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z14088 mRNA. Translation: CAA78466.1.
PIRiS26409.
RefSeqiXP_004228450.1. XM_004228402.2.
UniGeneiLes.3896.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiSolyc01g009590.2.1; Solyc01g009590.2.1; Solyc01g009590.2.
GeneIDi544145.
KEGGisly:544145.

Phylogenomic databases

InParanoidiQ43495.
OMAiTASTECC.

Family and domain databases

InterProiIPR016140. Bifunc_inhib/LTP/seed_store.
[Graphical view]
SMARTiSM00499. AAI. 1 hit.
[Graphical view]
SUPFAMiSSF47699. SSF47699. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Nucleotide sequence of a stamen- and tapetum-specific gene from Lycopersicon esculentum."
    Chen R., Smith A.G.
    Plant Physiol. 101:1413-1413(1993) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Strain: cv. VF36.
    Tissue: Anther.

Entry informationi

Entry namei108_SOLLC
AccessioniPrimary (citable) accession number: Q43495
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 15, 1999
Last sequence update: November 1, 1996
Last modified: February 4, 2015
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.