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Protein
Submitted name:

Glycinin

Gene

Gy4

Organism
Glycine max (Soybean) (Glycine hispida)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Seed storage protein.UniRule annotation
This protein found in the seeds of many leguminous and non-leguminous plants is the source of sulfur-containing amino acids in seed meals.UniRule annotation

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Seed storage proteinUniRule annotation, Storage protein

Names & Taxonomyi

Protein namesi
Submitted name:
GlycininImported
Gene namesi
Name:Gy4Imported
OrganismiGlycine max (Soybean) (Glycine hispida)Imported
Taxonomic identifieri3847 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsFabalesFabaceaePapilionoideaePhaseoleaeGlycineSoja

Pathology & Biotechi

Protein family/group databases

Allergomei5821. Gly m 6.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2323UniRule annotationAdd
BLAST
Chaini24 – 562539UniRule annotationPRO_5007750928Add
BLAST

Keywords - PTMi

Disulfide bondUniRule annotation

Interactioni

Subunit structurei

Hexamer; each subunit is composed of an acidic and a basic chain derived from a single precursor and linked by a disulfide bond.UniRule annotation

Protein-protein interaction databases

STRINGi3847.GLYMA10G04280.1.

Structurei

3D structure databases

ProteinModelPortaliQ43452.
SMRiQ43452. Positions 30-550.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini37 – 249213Cupin_1InterPro annotationAdd
BLAST
Domaini390 – 536147Cupin_1InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the 11S seed storage protein (globulins) family.UniRule annotation

Keywords - Domaini

SignalUniRule annotation

Phylogenomic databases

eggNOGiENOG410IHSE. Eukaryota.
ENOG410YATH. LUCA.

Family and domain databases

Gene3Di2.60.120.10. 3 hits.
InterProiIPR022379. 11S_seedstore_CS.
IPR006044. 11S_seedstore_pln.
IPR006045. Cupin_1.
IPR014710. RmlC-like_jellyroll.
IPR011051. RmlC_Cupin.
[Graphical view]
PfamiPF00190. Cupin_1. 2 hits.
[Graphical view]
PRINTSiPR00439. 11SGLOBULIN.
SMARTiSM00835. Cupin_1. 2 hits.
[Graphical view]
SUPFAMiSSF51182. SSF51182. 4 hits.
PROSITEiPS00305. 11S_SEED_STORAGE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q43452-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGKPFTLSLS SLCLLLLSSA CFAISSSKLN ECQLNNLNAL EPDHRVEFEG
60 70 80 90 100
GLIQTWNSQH PELKCAGVTV SKLTLNRNGL HLPSYSPYPR MIIIAQGKGA
110 120 130 140 150
LQCKPGCPET FEEPQEQSNR RGSRSQKQQL QDSHQKIRHF NEGDVLVIPP
160 170 180 190 200
GVPYWTYNTG DEPVVAISLL DTSNFNNQLD QTPRVFYLAG NPDIEYPETM
210 220 230 240 250
QQQQQQKSHG GRKQGQHQQE EEEEGGSVLS GFSKHFLAQS FNTNEDIAEK
260 270 280 290 300
LQSPDDERKQ IVTVEGGLSV ISPKWQEQQD EDEDEDEDDE DEQIPSHPPR
310 320 330 340 350
RPSHGKREQD EDEDEDEDKP RPSRPSQGKR EQDQDQDEDE DEDEDQPRKS
360 370 380 390 400
REWRSKKTQP RRPRQEEPRE RGCETRNGVE ENICTLKLHE NIARPSRADF
410 420 430 440 450
YNPKAGRIST LNSLTLPALR QFQLSAQYVV LYKNGIYSPH WNLNANSVIY
460 470 480 490 500
VTRGQGKVRV VNCQGNAVFD GELRRGQLLV VPQNFVVAEQ AGEQGFEYIV
510 520 530 540 550
FKTHHNAVTS YLKDVFRAIP SEVLAHSYNL RQSQVSELKY EGNWGPLVNP
560
ESQQGSPRVK VA
Length:562
Mass (Da):63,876
Last modified:November 1, 1996 - v1
Checksum:i3A4EF28E448AB15A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X52863 Genomic DNA. Translation: CAA37044.1.
PIRiPQ0199.
S20946.
UniGeneiGma.29627.
Gma.35585.
Gma.62673.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X52863 Genomic DNA. Translation: CAA37044.1.
PIRiPQ0199.
S20946.
UniGeneiGma.29627.
Gma.35585.
Gma.62673.

3D structure databases

ProteinModelPortaliQ43452.
SMRiQ43452. Positions 30-550.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3847.GLYMA10G04280.1.

Protein family/group databases

Allergomei5821. Gly m 6.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiENOG410IHSE. Eukaryota.
ENOG410YATH. LUCA.

Family and domain databases

Gene3Di2.60.120.10. 3 hits.
InterProiIPR022379. 11S_seedstore_CS.
IPR006044. 11S_seedstore_pln.
IPR006045. Cupin_1.
IPR014710. RmlC-like_jellyroll.
IPR011051. RmlC_Cupin.
[Graphical view]
PfamiPF00190. Cupin_1. 2 hits.
[Graphical view]
PRINTSiPR00439. 11SGLOBULIN.
SMARTiSM00835. Cupin_1. 2 hits.
[Graphical view]
SUPFAMiSSF51182. SSF51182. 4 hits.
PROSITEiPS00305. 11S_SEED_STORAGE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ43452_SOYBN
AccessioniPrimary (citable) accession number: Q43452
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: September 7, 2016
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.