Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

DNA-binding protein

Gene
N/A
Organism
Daucus carota (Wild carrot)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi37 – 96HomeoboxPROSITE-ProRule annotationAdd BLAST60

GO - Molecular functioni

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotationImported

Names & Taxonomyi

Protein namesi
Submitted name:
DNA-binding proteinImported
OrganismiDaucus carota (Wild carrot)Imported
Taxonomic identifieri4039 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridscampanulidsApialesApiaceaeApioideaeScandiceaeDaucinaeDaucusDaucus sect. Daucus

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Structurei

3D structure databases

ProteinModelPortaliQ43427.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini35 – 95HomeoboxInterPro annotationAdd BLAST61

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili94 – 142Sequence analysisAdd BLAST49

Keywords - Domaini

Coiled coilSequence analysis, HomeoboxPROSITE-ProRule annotationSAAS annotationImported

Family and domain databases

CDDicd00086. homeodomain. 1 hit.
InterProiView protein in InterPro
IPR009057. Homeobox-like.
IPR017970. Homeobox_CS.
IPR001356. Homeobox_dom.
IPR000047. HTH_motif.
IPR003106. Leu_zip_homeo.
PfamiView protein in Pfam
PF02183. HALZ. 1 hit.
PF00046. Homeobox. 1 hit.
PRINTSiPR00031. HTHREPRESSR.
SMARTiView protein in SMART
SM00389. HOX. 1 hit.
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiView protein in PROSITE
PS00027. HOMEOBOX_1. 1 hit.
PS50071. HOMEOBOX_2. 1 hit.

Sequencei

Sequence statusi: Complete.

Q43427-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVSFQDAKRK NPYDGFFMRS YDEEEIGDEE YDEYFQQPEK KRRLKADQIQ
60 70 80 90 100
FLEKSFETDN KLEPERKVQL AKELGLQPRQ VAIWFQNRRA RWKTKTLEKD
110 120 130 140 150
YDVLQNSYNS LKADYDNLLA EKEKLKAEVL DLTDKLLLKE DKGSKTVVFD
160 170 180 190 200
KQKVSAAFQQ ERVSNDISVG EVLSNSVMDC KQEDHNSVKS DAVDSDSPHY
210 220 230 240 250
SDEVYSSFME PVDRSYVFEP AQSDISQDEE DDMGNNLFLP SYHVFSKTED
260 270
GSYSDQPSNS SYFGFPVEDH TFGFWGTEL
Length:279
Mass (Da):32,513
Last modified:November 1, 1996 - v1
Checksum:iEACA707F295AB740
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D26575 mRNA. Translation: BAA05624.1.
PIRiT14332.

Similar proteinsi

Entry informationi

Entry nameiQ43427_DAUCA
AccessioniPrimary (citable) accession number: Q43427
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: September 27, 2017
This is version 96 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)