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Protein
Submitted name:

DNA-binding protein

Gene
N/A
Organism
Daucus carota (Wild carrot)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotationImported

Names & Taxonomyi

Protein namesi
Submitted name:
DNA-binding proteinImported
OrganismiDaucus carota (Wild carrot)Imported
Taxonomic identifieri4039 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridscampanulidsApialesApiaceaeApioideaeScandiceaeDaucinaeDaucusDaucus sect. Daucus

Subcellular locationi

  • Nucleus UniRule annotationSAAS annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

NucleusUniRule annotationSAAS annotation

Structurei

3D structure databases

ProteinModelPortaliQ43427.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini35 – 95Homeobox DNA-bindingInterPro annotationAdd BLAST61

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili94 – 142Sequence analysisAdd BLAST49

Keywords - Domaini

Coiled coilSequence analysis, HomeoboxUniRule annotationSAAS annotationImported

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
InterProiIPR017970. Homeobox_CS.
IPR001356. Homeobox_dom.
IPR009057. Homeodomain-like.
IPR000047. HTH_motif.
IPR003106. Leu_zip_homeo.
[Graphical view]
PfamiPF02183. HALZ. 1 hit.
PF00046. Homeobox. 1 hit.
[Graphical view]
PRINTSiPR00031. HTHREPRESSR.
SMARTiSM00389. HOX. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiPS00027. HOMEOBOX_1. 1 hit.
PS50071. HOMEOBOX_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q43427-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVSFQDAKRK NPYDGFFMRS YDEEEIGDEE YDEYFQQPEK KRRLKADQIQ
60 70 80 90 100
FLEKSFETDN KLEPERKVQL AKELGLQPRQ VAIWFQNRRA RWKTKTLEKD
110 120 130 140 150
YDVLQNSYNS LKADYDNLLA EKEKLKAEVL DLTDKLLLKE DKGSKTVVFD
160 170 180 190 200
KQKVSAAFQQ ERVSNDISVG EVLSNSVMDC KQEDHNSVKS DAVDSDSPHY
210 220 230 240 250
SDEVYSSFME PVDRSYVFEP AQSDISQDEE DDMGNNLFLP SYHVFSKTED
260 270
GSYSDQPSNS SYFGFPVEDH TFGFWGTEL
Length:279
Mass (Da):32,513
Last modified:November 1, 1996 - v1
Checksum:iEACA707F295AB740
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D26575 mRNA. Translation: BAA05624.1.
PIRiT14332.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D26575 mRNA. Translation: BAA05624.1.
PIRiT14332.

3D structure databases

ProteinModelPortaliQ43427.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
InterProiIPR017970. Homeobox_CS.
IPR001356. Homeobox_dom.
IPR009057. Homeodomain-like.
IPR000047. HTH_motif.
IPR003106. Leu_zip_homeo.
[Graphical view]
PfamiPF02183. HALZ. 1 hit.
PF00046. Homeobox. 1 hit.
[Graphical view]
PRINTSiPR00031. HTHREPRESSR.
SMARTiSM00389. HOX. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiPS00027. HOMEOBOX_1. 1 hit.
PS50071. HOMEOBOX_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ43427_DAUCA
AccessioniPrimary (citable) accession number: Q43427
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: October 5, 2016
This is version 91 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.