Unreviewed, UniProtKB/TrEMBL Q43294 (Q43294_ORYSA)

Names and origin

Protein names	Submitted name:     Chitinase EMBL CAA40107.1     EC=3.2.1.14
Organism	Oryza sativa (Rice) EMBL CAA40107.1
Taxonomic identifier	4530 [NCBI]
Taxonomic lineage	Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › BEP clade › Ehrhartoideae › Oryzeae › Oryza

Protein attributes

Sequence length	340 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Evidence at transcript level.

General annotation (Comments)

Sequence similarities

Contains 1 chitin-binding type-1 domain. RuleBase RU000410V1

Ontologies

Keywords
Domain	Signal
Ligand	Chitin-binding RuleBase RU000410V1 Spearmint SPM018371
Molecular function	Glycosidase Hydrolase
Gene Ontology (GO)
Biological process	cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro chitin catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	chitin binding Inferred from electronic annotation. Source: InterPro chitinase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 32	32	Potential EMBL CAA40107.1
	Chain	33 – 340	308	chitinase EMBL CAA40107.1		PRO_5000145750

Sequences

	Sequence		Length	Mass (Da)
	Q43294-1 [UniParc]. Last modified November 1, 1996. Version 1. Checksum: 642F13E3928CA7BE	FASTA	340	35,587
	10 20 30 40 50 60 MSTPRAAASL AKKAALVALA VLAAALATAA RAEQCGAQAG GARCPNCLCC SRWGWCGTTS 70 80 90 100 110 120 DFCGDGCQSQ CSGCGPTPTP TPPSPSDGVG SIVPRDLFER LLLHRNDGAC PARGFYTYEA 130 140 150 160 170 180 FLAAAAAFPA FGGTGNTETR KREVAAFLGQ TSHETTGGWP TAPDGPFSWG YCFKQEQNPP 190 200 210 220 230 240 SDYCQPSPEW PCAPGRKYYG RGPIQLSFNF NYGPAGRAIG VDLLSNPDLV ATDATVSFKT 250 260 270 280 290 300 ALWFWMTPQG NKPSSHDVIT GRWAPSPADA AAGRAPGYGV ITNIVNGGLE CGHGPDDRVA 310 320 330 340 NRIGFYQRYC GAFGIGTGGN LDCYNQRPFN SGSSVGLAEQ

References

[1]	"Sequence variation, differential expression and chromosomal location of rice chitinase genes." Nishizawa Y., Kishimoto N., Saito A., Hibi T. Mol. Gen. Genet. 241:1-10(1993) [PubMed: 7901749] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: Japonica EMBL CAA40107.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBLGenBankDDBJ	X56787 mRNA. Translation: CAA40107.1.
PIR	S39979. S40414.
3D structure databases
SMR	Q43294. Positions 33-330.
ModBase	Search...
Protein family/group databases
CAZy	CBM18. Carbohydrate-Binding Module Family 18. GH19. Glycoside Hydrolase Family 19.
Organism-specific databases
Gramene	Q43294.
Family and domain databases
InterPro	IPR018371. Chitin-binding_1_CS. IPR001002. Chitin_bd_1. IPR016283. Glyco_hydro_19. IPR000726. Glyco_hydro_19_cat. [Graphical view]
Gene3D	G3DSA:3.30.60.10. Chitin_bd_1. 1 hit.
PANTHER	PTHR22595. Glyco_hydro_19_cat. 1 hit.
Pfam	PF00187. Chitin_bind_1. 1 hit. PF00182. Glyco_hydro_19. 1 hit. [Graphical view]
PIRSF	PIRSF001060. Endochitinase. 1 hit.
PRINTS	PR00451. CHITINBINDNG.
ProDom	PD000609. Chitin_binding_1. 1 hit. PD354900. Glyco_hydro_19. 1 hit. [Graphical view] [Entries sharing at least one domain]
SMART	SM00270. ChtBD1. 1 hit. [Graphical view]
PROSITE	PS00026. CHIT_BIND_I_1. 1 hit. PS50941. CHIT_BIND_I_2. 1 hit. PS00773. CHITINASE_19_1. 1 hit. PS00774. CHITINASE_19_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q43294_ORYSA

Accession

Primary (citable) accession number: Q43294

Entry history

Integrated into UniProtKB/TrEMBL:	November 1, 1996
Last sequence update:	November 1, 1996
Last modified:	June 16, 2009
This is version 49 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)