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Q43260

- DHE3_MAIZE

UniProt

Q43260 - DHE3_MAIZE

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Protein

Glutamate dehydrogenase

Gene
GDH1
Organism
Zea mays (Maize)
Status
Reviewed - Annotation score: 4 out of 5 - Experimental evidence at protein leveli

Functioni

Catalytic activityi

L-glutamate + H2O + NAD(P)+ = 2-oxoglutarate + NH3 + NAD(P)H.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei102 – 1021 By similarity

GO - Molecular functioni

  1. ATP binding Source: EnsemblPlants/Gramene
  2. cobalt ion binding Source: EnsemblPlants/Gramene
  3. copper ion binding Source: EnsemblPlants/Gramene
  4. glutamate dehydrogenase [NAD(P)+] activity Source: UniProtKB-EC
  5. zinc ion binding Source: EnsemblPlants/Gramene

GO - Biological processi

  1. cellular amino acid metabolic process Source: InterPro
  2. regulation of nitrogen compound metabolic process Source: EnsemblPlants/Gramene
  3. response to absence of light Source: EnsemblPlants/Gramene
  4. response to cadmium ion Source: EnsemblPlants/Gramene
  5. response to salt stress Source: EnsemblPlants/Gramene
Complete GO annotation...

Keywords - Molecular functioni

Oxidoreductase

Keywords - Ligandi

NAD

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate dehydrogenase (EC:1.4.1.3)
Short name:
GDH
Gene namesi
Name:GDH1
OrganismiZea mays (Maize)
Taxonomic identifieri4577 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeZea

Organism-specific databases

GrameneiQ43260.
MaizeGDBi12238.

Subcellular locationi

GO - Cellular componenti

  1. mitochondrion Source: EnsemblPlants/Gramene
Complete GO annotation...

Pathology & Biotechi

Mutagenesis

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Mutagenesisi188 – 1881G → R in GDH1.
Mutagenesisi246 – 2461D → G in GDH1.
Mutagenesisi252 – 2532QL → EV in GDH1.
Mutagenesisi367 – 3671R → Q in GDH1.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 411411Glutamate dehydrogenasePRO_0000182749Add
BLAST

Proteomic databases

PRIDEiQ43260.

Structurei

3D structure databases

ProteinModelPortaliQ43260.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

HOGENOMiHOG000243801.
KOiK00261.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR006095. Glu/Leu/Phe/Val_DH.
IPR006096. Glu/Leu/Phe/Val_DH_C.
IPR006097. Glu/Leu/Phe/Val_DH_dimer_dom.
IPR014362. Glu_DH.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
PfamiPF00208. ELFV_dehydrog. 1 hit.
PF02812. ELFV_dehydrog_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000185. Glu_DH. 1 hit.
PRINTSiPR00082. GLFDHDRGNASE.
SMARTiSM00839. ELFV_dehydrog. 1 hit.
[Graphical view]
PROSITEiPS00074. GLFV_DEHYDROGENASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q43260-1 [UniParc]FASTAAdd to Basket

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MNALAATSRN FKQAAKLLGL DSKLEKSLLI PFREIKVECT IPKDDGTLAS    50
YVGFRVQHDN ARGPMKGGIR YHHEVDPDEV NALAQLMTWK TAVANIPYGG 100
AKGGIGCSPG DLSISELERL TRVFTQKIHD LIGIHTDVPA PDMGTNSQTM 150
AWILDEYSKF HGYSPAVVTG KPVDLGGSLG RDAATGRGVL FATEALLAEH 200
GKGIAGQRFV IQGFGNVGSW AAQLISEAGG KVIAISDVTG AVKNVDGLDI 250
AQLVKHSAEN KGIKGFKGGD AIAPDSLLTE ECDVLIPAAL GGVINKDNAN 300
DIKAKYIIEA ANHPTDPEAD EILSKKGVLI LPDILANSGG VTVSYFEWVQ 350
NIQGFMWDEE KVNAELRTYI TRAFGNVKQM CRSHSCDLRM GAFTLGVNRV 400
ARATVLRGWE A 411
Length:411
Mass (Da):44,022
Last modified:November 1, 1996 - v1
Checksum:i648C67A9338922CF
GO

Natural variant

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Natural varianti18 – 181L → V in strain: cv. P-10 Inbred.
Natural varianti370 – 3701I → M in strain: cv. P-10 Inbred.
Natural varianti376 – 3761N → D in strain: cv. P-10 Inbred.

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
D49475 mRNA. Translation: BAA08445.1.
U93560 mRNA. Translation: AAB51595.1.
U93561 mRNA. Translation: AAB51596.1.
PIRiT03294.
T04342.
RefSeqiNP_001105301.1. NM_001111831.1.
UniGeneiZm.160907.

Genome annotation databases

GeneIDi542220.
KEGGizma:542220.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
D49475 mRNA. Translation: BAA08445.1 .
U93560 mRNA. Translation: AAB51595.1 .
U93561 mRNA. Translation: AAB51596.1 .
PIRi T03294.
T04342.
RefSeqi NP_001105301.1. NM_001111831.1.
UniGenei Zm.160907.

3D structure databases

ProteinModelPortali Q43260.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi Q43260.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 542220.
KEGGi zma:542220.

Organism-specific databases

Gramenei Q43260.
MaizeGDBi 12238.

Phylogenomic databases

HOGENOMi HOG000243801.
KOi K00261.

Family and domain databases

Gene3Di 3.40.50.720. 1 hit.
InterProi IPR006095. Glu/Leu/Phe/Val_DH.
IPR006096. Glu/Leu/Phe/Val_DH_C.
IPR006097. Glu/Leu/Phe/Val_DH_dimer_dom.
IPR014362. Glu_DH.
IPR016040. NAD(P)-bd_dom.
[Graphical view ]
Pfami PF00208. ELFV_dehydrog. 1 hit.
PF02812. ELFV_dehydrog_N. 1 hit.
[Graphical view ]
PIRSFi PIRSF000185. Glu_DH. 1 hit.
PRINTSi PR00082. GLFDHDRGNASE.
SMARTi SM00839. ELFV_dehydrog. 1 hit.
[Graphical view ]
PROSITEi PS00074. GLFV_DEHYDROGENASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Isolation and characterization of a cDNA that encodes maize glutamate dehydrogenase."
    Sakakibara H., Fujii K., Sugiyama T.
    Plant Cell Physiol. 36:789-797(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Strain: cv. Golden cross Bantam T51.
    Tissue: Root.
  2. "Characterization of a GDH1-mutant in maize."
    Ju G.C.
    Submitted (MAR-1997) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [MRNA], MUTANT GDH1.
    Strain: cv. P-10 Inbred.
    Tissue: Shoot.

Entry informationi

Entry nameiDHE3_MAIZE
AccessioniPrimary (citable) accession number: Q43260
Secondary accession number(s): O04871, O04872
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: November 1, 1996
Last modified: July 9, 2014
This is version 85 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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