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Protein
Submitted name:

Chitinase

Gene

RC24

Organism
Oryza sativa (Rice)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Keywords - Ligandi

Chitin-bindingUniRule annotationSAAS annotation

Protein family/group databases

CAZyiCBM18. Carbohydrate-Binding Module Family 18.
GH19. Glycoside Hydrolase Family 19.

Names & Taxonomyi

Protein namesi
Submitted name:
ChitinaseImported (EC:3.2.1.14Imported)
Gene namesi
Name:RC24Imported
OrganismiOryza sativa (Rice)Imported
Taxonomic identifieri4530 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 20Sequence analysisAdd BLAST20
ChainiPRO_500423174621 – 322Sequence analysisAdd BLAST302

Keywords - PTMi

Disulfide bondSAAS annotation

Proteomic databases

PRIDEiQ42995.

Interactioni

Protein-protein interaction databases

STRINGi39946.BGIOSGA023633-PA.

Structurei

3D structure databases

ProteinModelPortaliQ42995.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini20 – 61Chitin-binding type-1InterPro annotationAdd BLAST42

Sequence similaritiesi

Belongs to the glycosyl hydrolase 19 family.SAAS annotation
Contains 1 chitin-binding type-1 domain.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiKOG4742. Eukaryota.
COG3979. LUCA.

Family and domain databases

CDDicd00325. chitinase_glyco_hydro_19. 1 hit.
Gene3Di3.30.60.10. 1 hit.
InterProiIPR001002. Chitin-bd_1.
IPR018371. Chitin-binding_1_CS.
IPR016283. Glyco_hydro_19.
IPR000726. Glyco_hydro_19_cat.
IPR023346. Lysozyme-like_dom.
[Graphical view]
PfamiPF00187. Chitin_bind_1. 1 hit.
PF00182. Glyco_hydro_19. 1 hit.
[Graphical view]
PIRSFiPIRSF001060. Endochitinase. 1 hit.
PRINTSiPR00451. CHITINBINDNG.
ProDomiPD000609. Chitin_bd_1. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SMARTiSM00270. ChtBD1. 1 hit.
[Graphical view]
SUPFAMiSSF53955. SSF53955. 1 hit.
SSF57016. SSF57016. 1 hit.
PROSITEiPS00026. CHIT_BIND_I_1. 1 hit.
PS50941. CHIT_BIND_I_2. 1 hit.
PS00774. CHITINASE_19_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q42995-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRALALVVVA TAFAVVAVQP EQCGSQARGA LCPNCLCCSQ YGWCGSTSAY
60 70 80 90 100
CGSGCQSQCS RQLRRRRPDR PSGGGGSGVA SIVSRSLFDQ MLLHRNDAAC
110 120 130 140 150
PAKNLYTYDA FVAAANAFPT FATTGDAATR KREVAAFLAQ TSHETMGGWA
160 170 180 190 200
TAPDGPYSWG YCFKEENNGN VGSDYCVQSS QWPCRAGKKY YGRGPIQISY
210 220 230 240 250
NYNYGPAGQA IGSNLLSNPD LASDATVSFK TAFWFWMTPQ SPKPSCHAVM
260 270 280 290 300
TGQWTPNGND QAAGRVPGYG VVTNIINGGV ECGHGADSRV ADRIGFYKRY
310 320
CDMLGVSYGA NLDCYNQRPF NS
Length:322
Mass (Da):34,506
Last modified:November 1, 1996 - v1
Checksum:iAD56FE9CF7D99B09
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X87109 Genomic DNA. Translation: CAA60590.1.
PIRiS65771. S54806.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X87109 Genomic DNA. Translation: CAA60590.1.
PIRiS65771. S54806.

3D structure databases

ProteinModelPortaliQ42995.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi39946.BGIOSGA023633-PA.

Protein family/group databases

CAZyiCBM18. Carbohydrate-Binding Module Family 18.
GH19. Glycoside Hydrolase Family 19.

Proteomic databases

PRIDEiQ42995.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiKOG4742. Eukaryota.
COG3979. LUCA.

Family and domain databases

CDDicd00325. chitinase_glyco_hydro_19. 1 hit.
Gene3Di3.30.60.10. 1 hit.
InterProiIPR001002. Chitin-bd_1.
IPR018371. Chitin-binding_1_CS.
IPR016283. Glyco_hydro_19.
IPR000726. Glyco_hydro_19_cat.
IPR023346. Lysozyme-like_dom.
[Graphical view]
PfamiPF00187. Chitin_bind_1. 1 hit.
PF00182. Glyco_hydro_19. 1 hit.
[Graphical view]
PIRSFiPIRSF001060. Endochitinase. 1 hit.
PRINTSiPR00451. CHITINBINDNG.
ProDomiPD000609. Chitin_bd_1. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SMARTiSM00270. ChtBD1. 1 hit.
[Graphical view]
SUPFAMiSSF53955. SSF53955. 1 hit.
SSF57016. SSF57016. 1 hit.
PROSITEiPS00026. CHIT_BIND_I_1. 1 hit.
PS50941. CHIT_BIND_I_2. 1 hit.
PS00774. CHITINASE_19_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ42995_ORYSA
AccessioniPrimary (citable) accession number: Q42995
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: November 30, 2016
This is version 89 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.