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Q42961 (PGKH_TOBAC) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 64. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Phosphoglycerate kinase, chloroplastic

EC=2.7.2.3
OrganismNicotiana tabacum (Common tobacco)
Taxonomic identifier4097 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeNicotianoideaeNicotianeaeNicotiana

Protein attributes

Sequence length481 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at protein level

General annotation (Comments)

Catalytic activity

ATP + 3-phospho-D-glycerate = ADP + 3-phospho-D-glyceroyl phosphate. HAMAP-Rule MF_00145

Pathway

Carbohydrate biosynthesis; Calvin cycle. HAMAP-Rule MF_00145

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00145

Subcellular location

Plastidchloroplast HAMAP-Rule MF_00145.

Sequence similarities

Belongs to the phosphoglycerate kinase family.

Ontologies

Keywords
   Biological processCalvin cycle
   Cellular componentChloroplast
Plastid
   DomainTransit peptide
   LigandATP-binding
Nucleotide-binding
   Molecular functionKinase
Transferase
Gene Ontology (GO)
   Biological_processglycolysis

Inferred from electronic annotation. Source: InterPro

reductive pentose-phosphate cycle

Inferred from electronic annotation. Source: UniProtKB-UniPathway

   Cellular_componentchloroplast

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_functionATP binding

Inferred from electronic annotation. Source: UniProtKB-KW

phosphoglycerate kinase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Transit peptide1 – 7575Chloroplast Potential
Chain76 – 481406Phosphoglycerate kinase, chloroplastic HAMAP-Rule MF_00145
PRO_0000023892

Regions

Nucleotide binding431 – 4344ATP By similarity
Region99 – 1013Substrate binding By similarity
Region138 – 1414Substrate binding By similarity

Sites

Binding site1151Substrate By similarity
Binding site1961Substrate By similarity
Binding site2291Substrate By similarity
Binding site2801ATP By similarity
Binding site3711ATP; via carbonyl oxygen By similarity
Binding site4021ATP By similarity

Sequences

Sequence LengthMass (Da)Tools
Q42961 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: 7AA497C747D0716D

FASTA48150,177
        10         20         30         40         50         60 
MASATASHTL CGIPATSSST TNKAIAPSSA RFLAKTPLRR LGFAGAAADS LFTNHVATKL 

        70         80         90        100        110        120 
RSLKSSSKPI RGVASMAKKS VGDLTAAELK GKKVFVRADL NVPLDDNQNI TDDTRIRAAV 

       130        140        150        160        170        180 
PTIKHLMANG AKVILSSHLG RPKGVTPKYS LAPLVPRLSE LLGIQVVKVE DCIGPEVEKL 

       190        200        210        220        230        240 
VASLPEGGVL LLENVRFYKE EEKNEPEFAK KLASLADLYV NDAFGTAHRA HASTEGVTKF 

       250        260        270        280        290        300 
LKPSVAGFLL QKELDYLVGA VSNPKRPFAA IVGGSKVSSK IGVIESLLEK CDILLLGGGM 

       310        320        330        340        350        360 
IFTFYKAQGL SVGSSLVEED KLELATSLLE KAKAKGVSLL LPSDVVIADK FAPDANSKIV 

       370        380        390        400        410        420 
PASAIPDGWM GLDIGPDSVK TFNDALDTTK TVIWNGPMGV FEFDKFAVGT EAIAKKLADL 

       430        440        450        460        470        480 
SGKGVTTIIG GGDSVAAVEK VGVASVMSHI STGGGASLEL LEGKVLPGVI ALDEADAPVA 


V 

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References

[1]"Nucleotide sequences of cDNAs encoding the chloroplastic and cytosolic phosphoglycerate kinases from tobacco."
Rao S.K., Bringloe D.H., Dyer T.A., Raines C.A., Bradbeer J.W.
Plant Gene Register PGR95-090
Cited for: NUCLEOTIDE SEQUENCE [MRNA].
Strain: cv. Samsun.
Tissue: Leaf.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
Z48977 mRNA. Translation: CAA88841.1.
PIRT03660.

3D structure databases

ProteinModelPortalQ42961.
SMRQ42961. Positions 76-474.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEQ42961.
ProMEXQ42961.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Enzyme and pathway databases

UniPathwayUPA00116.

Family and domain databases

Gene3D3.40.50.1260. 1 hit.
3.40.50.1270. 1 hit.
HAMAPMF_00145. Phosphoglyc_kinase.
InterProIPR001576. Phosphoglycerate_kinase.
IPR015901. Phosphoglycerate_kinase_C.
IPR015911. Phosphoglycerate_kinase_CS.
IPR015824. Phosphoglycerate_kinase_N.
[Graphical view]
PANTHERPTHR11406. PTHR11406. 1 hit.
PfamPF00162. PGK. 1 hit.
[Graphical view]
PIRSFPIRSF000724. Pgk. 1 hit.
PRINTSPR00477. PHGLYCKINASE.
SUPFAMSSF53748. SSF53748. 1 hit.
PROSITEPS00111. PGLYCERATE_KINASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry namePGKH_TOBAC
AccessionPrimary (citable) accession number: Q42961
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1996
Last modified: February 19, 2014
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways