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Protein

Lipoxygenase

Gene

LoxC

Organism
Hordeum vulgare subsp. vulgare (Domesticated barley)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.UniRule annotation

Cofactori

Fe cationUniRule annotationSAAS annotation

Pathwayi: oxylipin biosynthesis

This protein is involved in the pathway oxylipin biosynthesis, which is part of Lipid metabolism.UniRule annotation
View all proteins of this organism that are known to be involved in the pathway oxylipin biosynthesis and in Lipid metabolism.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDioxygenaseUniRule annotationSAAS annotation, Oxidoreductase
Biological processFatty acid biosynthesis, Fatty acid metabolism, Lipid biosynthesis, Lipid metabolism, Oxylipin biosynthesisUniRule annotation
LigandIronUniRule annotationSAAS annotation, Metal-bindingUniRule annotationSAAS annotation

Enzyme and pathway databases

UniPathwayiUPA00382

Names & Taxonomyi

Protein namesi
Recommended name:
LipoxygenaseUniRule annotation (EC:1.13.11.-UniRule annotation)
Gene namesi
Name:LoxCImported
OrganismiHordeum vulgare subsp. vulgare (Domesticated barley)Imported
Taxonomic identifieri112509 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladePooideaeTriticodaeTriticeaeHordeinaeHordeum

Expressioni

Gene expression databases

ExpressionAtlasiQ42847 differential

Interactioni

Protein-protein interaction databases

IntActiQ42847, 1 interactor

Structurei

3D structure databases

ProteinModelPortaliQ42847
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini35 – 163PLATInterPro annotationAdd BLAST129
Domaini166 – 864LipoxygenaseInterPro annotationAdd BLAST699

Sequence similaritiesi

Belongs to the lipoxygenase family.UniRule annotation

Family and domain databases

Gene3Di4.10.372.10, 1 hit
InterProiView protein in InterPro
IPR000907 LipOase
IPR013819 LipOase_C
IPR036226 LipOase_C_sf
IPR020834 LipOase_CS
IPR020833 LipOase_Fe_BS
IPR001246 LipOase_plant
IPR027433 Lipoxygenase_dom_3
IPR001024 PLAT/LH2_dom
IPR036392 PLAT/LH2_dom_sf
PANTHERiPTHR11771 PTHR11771, 1 hit
PfamiView protein in Pfam
PF00305 Lipoxygenase, 1 hit
PF01477 PLAT, 1 hit
PRINTSiPR00087 LIPOXYGENASE
PR00468 PLTLPOXGNASE
SMARTiView protein in SMART
SM00308 LH2, 1 hit
SUPFAMiSSF48484 SSF48484, 1 hit
SSF49723 SSF49723, 1 hit
PROSITEiView protein in PROSITE
PS00711 LIPOXYGENASE_1, 1 hit
PS00081 LIPOXYGENASE_2, 1 hit
PS51393 LIPOXYGENASE_3, 1 hit
PS50095 PLAT, 1 hit

Sequencei

Sequence statusi: Complete.

Q42847-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLGVGGIVSD LTGGIRGAHL KGSVVLMRKN ALDFNDFGAH VMDGVTELLG
60 70 80 90 100
RGVTCQLISS TNVDHNNGGR GKVGAEANLE QWLLPTNLPF ITTGENKFAV
110 120 130 140 150
TFDWSVDKLG VPGAIIVKNN HASEFFLKTI TLDNVPGRGT IVFVANSWVY
160 170 180 190 200
PQAKYRYNRV FFANDTYLPH QMPAALKPYR DDELRNLRGD DQQGPYLDHD
210 220 230 240 250
RVYRYDVYND LGDSRDVLGG SKDLPYPRRC RTGRKPSDSK PDHESRLLLL
260 270 280 290 300
VQNVYVLRDE LFGHLKQSDL LGYTLKGWLD GIILAIRTYV DLSPGEFDSF
310 320 330 340 350
ADILKLYEGG IKLPNIPALE EVRKRFPLQL VKDLIPKGGD FLLKLPKPEI
360 370 380 390 400
IKVDQKAWMT DEEFAREMLA GVNPMMIKRL TEFPPKSTLD PSKYGDHTST
410 420 430 440 450
MTEEHVAKSL EGLTVQQALA GNRLYIVDQH DNLMPFLIDI NNLDASFVYA
460 470 480 490 500
TRTLLFLRGD GTLAPVAIEL SSPLIQGELT TAKSAVYTPQ HAGVEGWIWQ
510 520 530 540 550
LAKAYASVND YGWHQLISHW LNTHAVMEPF VIATNRQLSV THPVYKLLHP
560 570 580 590 600
HYRDTMNINA RARGLLINAG GVIEMTVFPH KHAMPMSSMV YKHWNFTEQA
610 620 630 640 650
LPADLIKRGM AVEDASSPHK VRLLIKDYPY ATDGLAVWDA IEQWVSDYLT
660 670 680 690 700
IYYPNDGVLQ GDVELQAWWK EVREVGHGDL KDAAWWPKMQ TVAELIKACA
710 720 730 740 750
TIIWTGSALH AAVNFGQYPY SGYHPNKPSA SRRPMPVQGS EEYAELERDP
760 770 780 790 800
EKAFIRTITS QFHALVGISL MEILSKHSSD EVYLGQHDTP AWTSDAKALE
810 820 830 840 850
AFKRFGAKLE GIEKQVVAMN SDPQLKNRTG PAKFPYMLLY PNTSDHTGQA
860
EGLTARGIPN SISI
Length:864
Mass (Da):96,748
Last modified:January 1, 1998 - v2
Checksum:iA15DA282FB7F9973
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L37358 mRNA Translation: AAB70865.1
PIRiT05945

Similar proteinsi

Entry informationi

Entry nameiQ42847_HORVV
AccessioniPrimary (citable) accession number: Q42847
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: January 1, 1998
Last modified: March 28, 2018
This is version 115 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health