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Protein

Lipoxygenase

Gene

LoxB

Organism
Hordeum vulgare (Barley)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.UniRule annotation

Cofactori

Fe cationUniRule annotationSAAS annotation

Pathwayi: oxylipin biosynthesis

This protein is involved in the pathway oxylipin biosynthesis, which is part of Lipid metabolism.UniRule annotation
View all proteins of this organism that are known to be involved in the pathway oxylipin biosynthesis and in Lipid metabolism.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDioxygenaseUniRule annotationSAAS annotation, Oxidoreductase
Biological processFatty acid biosynthesis, Fatty acid metabolism, Lipid biosynthesis, Lipid metabolism, Oxylipin biosynthesisUniRule annotation
LigandIronUniRule annotationSAAS annotation, Metal-bindingUniRule annotationSAAS annotation

Enzyme and pathway databases

UniPathwayiUPA00382

Names & Taxonomyi

Protein namesi
Recommended name:
LipoxygenaseUniRule annotation (EC:1.13.11.-UniRule annotation)
Gene namesi
Name:LoxBImported
OrganismiHordeum vulgare (Barley)Imported
Taxonomic identifieri4513 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladePooideaeTriticodaeTriticeaeHordeinaeHordeum

Expressioni

Gene expression databases

ExpressionAtlasiQ42846 differential

Interactioni

Protein-protein interaction databases

IntActiQ42846, 1 interactor

Structurei

3D structure databases

ProteinModelPortaliQ42846
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini38 – 165PLATInterPro annotationAdd BLAST128
Domaini164 – 876LipoxygenaseInterPro annotationAdd BLAST713

Sequence similaritiesi

Belongs to the lipoxygenase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG410IH0D Eukaryota
ENOG410YN4N LUCA

Family and domain databases

Gene3Di4.10.372.10, 1 hit
InterProiView protein in InterPro
IPR000907 LipOase
IPR013819 LipOase_C
IPR036226 LipOase_C_sf
IPR020834 LipOase_CS
IPR020833 LipOase_Fe_BS
IPR001246 LipOase_plant
IPR027433 Lipoxygenase_dom_3
IPR001024 PLAT/LH2_dom
IPR036392 PLAT/LH2_dom_sf
PANTHERiPTHR11771 PTHR11771, 1 hit
PfamiView protein in Pfam
PF00305 Lipoxygenase, 1 hit
PF01477 PLAT, 1 hit
PRINTSiPR00087 LIPOXYGENASE
PR00468 PLTLPOXGNASE
SMARTiView protein in SMART
SM00308 LH2, 1 hit
SUPFAMiSSF48484 SSF48484, 1 hit
SSF49723 SSF49723, 1 hit
PROSITEiView protein in PROSITE
PS00711 LIPOXYGENASE_1, 1 hit
PS00081 LIPOXYGENASE_2, 1 hit
PS51393 LIPOXYGENASE_3, 1 hit
PS50095 PLAT, 1 hit

Sequencei

Sequence statusi: Complete.

Q42846-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLLHGLVDRL TGKNKEAWKE GKIRGTAVLV KSDVLDLGDF HASLLDGVHK
60 70 80 90 100
ILGKDDGVSF RLVSATAPDP QNGSRGKVGK PAHLEEMVVT MKSTAAGESV
110 120 130 140 150
FKVTFEWDDS QGVPGAVIVR NTYRSEYLLK TLTLHGVPGK GTVVFVANSW
160 170 180 190 200
IYPNVDRLFF ANDTYLPSKM PALLVQYRQD ELNNLRGDDT TGEYKEADRV
210 220 230 240 250
YRYDYYNDLG EPDNDNPRPV LGGTQELPYP RRCRTGRPPT ETDPRSESRI
260 270 280 290 300
PKYKIKEALN IYVPRDERFG HLKLSDFLGY SLKAITEAIL PITRTYVDST
310 320 330 340 350
PKEFDSFQDI YNLYDGLLKV PDNQHLKELK NKSLQFIKKS LAVAGDDSKL
360 370 380 390 400
ALPHVIKSDQ YAWRSDEEFA REMLAAVDPV CIRRLTKFPV KKYLDPSVYG
410 420 430 440 450
DQSSTITEDQ IQLNLEDGLT VRQAMDKKRL FILDHHDNFM PFLDRINKLE
460 470 480 490 500
GNYIYASRTL LFLKADGTLK PLAIELSQPH PDGIQHGAKS TVYLPADINS
510 520 530 540 550
GVDGQIWQLA KAYASVDDSA WHQLISHWLN THAVIEPFVI ATNRQLSVVH
560 570 580 590 600
PVHKLLSPHY RDTLNINALA RTTLINAGGV FELTVFPGQY ALEMSAVVYK
610 620 630 640 650
NWKLTEQGLP DDLVKRGMAV PDESSPYGIR LLIKDYPYAV DGLVIWWAIE
660 670 680 690 700
RWVNEYLAIY YPNDGVLRAD KELEEWWKEV REVGHGDLKD ADWWPKMVTV
710 720 730 740 750
QELAKTCTTI IWVASALHAA VNFGQYPYAG YLPNRPTVSR RPMPKEGDEE
760 770 780 790 800
YEQLKEGGEA ADMVFIHTIT SQFQTILGIT LIEILSKHSS DEVYLGQRDT
810 820 830 840 850
PEWTSDAKAL EAFKRFGSRL VEIEKRILDM NKDPALKNRN GPVKMPYMLL
860 870
YPNTSDANGE KALGLTAMGI PNSVSI
Length:876
Mass (Da):98,979
Last modified:January 1, 1998 - v2
Checksum:i5EF5B57FF641B56B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L37359 mRNA Translation: AAB60715.1
PIRiT05943

Similar proteinsi

Entry informationi

Entry nameiQ42846_HORVU
AccessioniPrimary (citable) accession number: Q42846
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: January 1, 1998
Last modified: March 28, 2018
This is version 116 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health