Reviewed,
UniProtKB/Swiss-Prot Q42840 (HEM6_HORVU)
Last modified
November 25, 2008.
Version 50.
History...
Clusters with 100%,
90%,
50% identity |
Documents (2) |
Third-party data |
Customize display | text xml rdf/xml gff fasta |
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents
Names and origin
| Protein names | Recommended name: Coproporphyrinogen III oxidase, chloroplastic Short name=Coproporphyrinogenase Short name=Coprogen oxidase EC=1.3.3.3 | ||
| Gene names |
| ||
| Organism | Hordeum vulgare (Barley) | ||
| Taxonomic identifier | 4513 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › BEP clade › Pooideae › Triticeae › Hordeum |
Protein attributes
| Sequence length | 391 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at transcript level. |
General annotation (Comments)
| Catalytic activity | Coproporphyrinogen-III + O(2) + 2 H(+) = protoporphyrinogen-IX + 2 CO(2) + 2 H(2)O. |
| Pathway | |
| Subcellular location | Plastid › chloroplastProbable. |
| Sequence similarities | Belongs to the aerobic coproporphyrinogen III oxidase family. |
Ontologies
Keywords | |
|---|---|
| Biological process | Heme biosynthesis Porphyrin biosynthesis |
| Cellular component | Chloroplast Plastid |
| Domain | Transit peptide |
| Molecular function | Oxidoreductase |
Gene Ontology (GO) | |
| Biological process | heme biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW oxidation reductionInferred from electronic annotation. Source: UniProtKB-KW |
| Cellular component | chloroplast Inferred from electronic annotation. Source: UniProtKB-KW |
| Molecular function | coproporphyrinogen oxidase activity Inferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | |
Molecule processing | ||||||
|---|---|---|---|---|---|---|
| Transit peptide | 1 – ? | Chloroplast Potential | ||||
| Chain | ? – 391 | Coproporphyrinogen III oxidase, chloroplastic | PRO_0000006032 | |||
Sequences
| ||||||||||||||||||
References
| [1] | "Coproporphyrinogen III oxidase from barley and tobacco -- sequence analysis and initial expression studies." Kruse E., Mock H.-P., Grimm B. Planta 196:796-803(1995) [PubMed: 7580857] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA]. Strain: cv. Svalofs Bonus. Tissue: Leaf. |
Cross-references
Sequence databases | |
|---|---|
| X82830 mRNA. Translation: CAA58037.1. | |
| PIR | T04486. |
3D structure databases | |
| ModBase | Search... |
Organism-specific databases | |
| Gramene | Q42840. |
Family and domain databases | |
| InterPro | IPR001260. Coprogen_oxidas. [Graphical view] |
| Gene3D | G3DSA:3.40.1500.10. Coprogen_oxidas. 1 hit. |
| PANTHER | PTHR10755. Coprogen_oxidas. 1 hit. |
| Pfam | PF01218. Coprogen_oxidas. 1 hit. [Graphical view] |
| PIRSF | PIRSF000166. Coproporphyri_ox. 1 hit. |
| PRINTS | PR00073. COPRGNOXDASE. |
| PROSITE | PS01021. COPROGEN_OXIDASE. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | HEM6_HORVU | ||||||||
| Accession | Primary (citable) accession number: Q42840 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | PPAP (Plant Proteome Annotation Project) | ||||||||
Relevant documents
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |

Clusters with


