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Protein
Submitted name:

MADS box regulatory protein

Gene

RaD2

Organism
Rumex acetosa (Garden sorrel) (Sour dock)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotationSAAS annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
MADS box regulatory proteinImported
Gene namesi
Name:RaD2Imported
OrganismiRumex acetosa (Garden sorrel) (Sour dock)Imported
Taxonomic identifieri41241 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeCaryophyllalesPolygonaceaePolygonoideaeRumiceaeRumex

Subcellular locationi

  • Nucleus UniRule annotationSAAS annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

NucleusUniRule annotationSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini1 – 6161MADS-boxInterPro annotationAdd
BLAST
Domaini84 – 17491K-boxInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains 1 MADS-box domain.UniRule annotation
Contains K-box domain.SAAS annotation

Family and domain databases

InterProiIPR002487. TF_Kbox.
IPR002100. TF_MADSbox.
[Graphical view]
PfamiPF01486. K-box. 1 hit.
PF00319. SRF-TF. 1 hit.
[Graphical view]
PRINTSiPR00404. MADSDOMAIN.
SMARTiSM00432. MADS. 1 hit.
[Graphical view]
SUPFAMiSSF55455. SSF55455. 1 hit.
PROSITEiPS51297. K_BOX. 1 hit.
PS50066. MADS_BOX_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q42503-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTRGQIQIRR IENITNRQVT YSKRRNGLFK KAQELVVLCD AKVSIIMISS
60 70 80 90 100
RNKLHEFTTP GTTTKQIYDM YQQLSGNDVW SSQYAMMLEE LRKIKEANGN
110 120 130 140 150
IRKEIRRRMG FSMEDMSFRE LVILQQDMQD SVAKISERKY KAIANQIETT
160 170 180 190
RKKLRNSHGI HRSLVHAFGA LNLNEYGADP PTAAGSYLTT YTYLE
Length:195
Mass (Da):22,618
Last modified:November 1, 1996 - v1
Checksum:iE17405AE5C937F26
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U28483 mRNA. Translation: AAA80305.1.
X89108 mRNA. Translation: CAA61481.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U28483 mRNA. Translation: AAA80305.1.
X89108 mRNA. Translation: CAA61481.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

InterProiIPR002487. TF_Kbox.
IPR002100. TF_MADSbox.
[Graphical view]
PfamiPF01486. K-box. 1 hit.
PF00319. SRF-TF. 1 hit.
[Graphical view]
PRINTSiPR00404. MADSDOMAIN.
SMARTiSM00432. MADS. 1 hit.
[Graphical view]
SUPFAMiSSF55455. SSF55455. 1 hit.
PROSITEiPS51297. K_BOX. 1 hit.
PS50066. MADS_BOX_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Male and female flowers of the dioecious plant sorrel show different patterns of MADS box gene expression."
    Ainsworth C., Crossley S., Buchanan-Wollaston V., Thangavelu M., Parker J.
    Plant Cell 7:1583-1598(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
  2. "Male and female flowers from the dioecious plant Rumex acetosa show different patterns of MADS box gene expression."
    Ainsworth C., Thangavelu M., Crossley S., Buchanan-Wollaston V., Parker J.
    Submitted (JUN-1995) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiQ42503_RUMAC
AccessioniPrimary (citable) accession number: Q42503
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: May 11, 2016
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.