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Protein
Submitted name:

High mobility group protein

Gene
N/A
Organism
Canavalia gladiata (Sword bean) (Dolichos gladiatus)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
High mobility group proteinImported
OrganismiCanavalia gladiata (Sword bean) (Dolichos gladiatus)Imported
Taxonomic identifieri3824 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsFabalesFabaceaePapilionoideaePhaseoleaeCanavalia

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Structurei

3D structure databases

ProteinModelPortaliQ42492.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini11 – 80H15InterPro annotationAdd BLAST70

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiView protein in InterPro
IPR017956. AT_hook_DNA-bd_motif.
IPR005818. Histone_H1/H5_H15.
IPR000116. HMGA.
IPR031059. HMGA_plant.
IPR036388. WH-like_DNA-bd_sf.
IPR036390. WH_DNA-bd_sf.
PANTHERiPTHR11467:SF49. PTHR11467:SF49. 1 hit.
PfamiView protein in Pfam
PF02178. AT_hook. 4 hits.
PF00538. Linker_histone. 1 hit.
PRINTSiPR00929. ATHOOK.
PR00930. HIGHMOBLTYIY.
SMARTiView protein in SMART
SM00384. AT_hook. 4 hits.
SM00526. H15. 1 hit.
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiView protein in PROSITE
PS51504. H15. 1 hit.

Sequencei

Sequence statusi: Complete.

Q42492-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATEEVNKPP SLPPYTEMIT KALDSLNEPN GSNKSAISKY IESTCGELPD
60 70 80 90 100
GHSTLLAHHL NKMKESGELV FLKNNYMKPD PTSPPKRGRG RPPKPKVPLP
110 120 130 140 150
PGTVLSPPRP RGRPPKDPNA PTKSPKAKVS TGSGRPRGRP KKIARSAAVV
160 170
APTPGPSGRP RGRPPKVKPQ LTEVSVES
Length:178
Mass (Da):19,061
Last modified:November 1, 1996 - v1
Checksum:i4FEF6903B39F45BE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D83071 mRNA. Translation: BAA11767.1.
D86595 Genomic DNA. Translation: BAA13134.1.
PIRiT09585.

Similar proteinsi

Entry informationi

Entry nameiQ42492_CANGL
AccessioniPrimary (citable) accession number: Q42492
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: October 25, 2017
This is version 94 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)