Skip Header

Contribute Send feedback
Read comments (?) or add your own

Q42456 (ASPR1_ORYSJ) Reviewed, UniProtKB/Swiss-Prot

Last modified November 16, 2011. Version 85. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Aspartic proteinase oryzasin-1

EC=3.4.23.-
Gene names
Ordered Locus Names:Os05g0567100, LOC_Os05g49200
ORF Names:OJ1781_H11.11
OrganismOryza sativa subsp. japonica (Rice)
Taxonomic identifier39947 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

Protein attributes

Sequence length509 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level

General annotation (Comments)

Developmental stage

Seed ripening and germination.

Sequence similarities

Belongs to the peptidase A1 family.

Contains 1 saposin B-type domain.

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2020 Potential
Propeptide21 – 6747Activation peptide Potential
PRO_0000025908
Chain68 – 509442Aspartic proteinase oryzasin-1
PRO_0000025909

Regions

Domain315 – 420106Saposin B-type

Sites

Active site1031 By similarity
Active site2901 By similarity

Amino acid modifications

Glycosylation2521N-linked (GlcNAc...) Potential
Glycosylation4001N-linked (GlcNAc...) Potential
Disulfide bond116 ↔ 122 By similarity
Disulfide bond281 ↔ 285 By similarity
Disulfide bond428 ↔ 465 By similarity

Experimental info

Sequence conflict251A → E in BAA06875. Ref.1
Sequence conflict251A → E in BAA06876. Ref.1
Sequence conflict4431G → A in BAA06875. Ref.1
Sequence conflict4431G → A in BAA06876. Ref.1

Sequences

Sequence LengthMass (Da)Tools
Q42456 [UniParc].

Last modified October 25, 2005. Version 2.
Checksum: 6316EB933C5749C2

FASTA50954,074
        10         20         30         40         50         60 
MGTRSVALVL LAAVLLQALL PASAAEGLVR IALKKRPIDE NSRVAARLSG EEGARRLGLR 

        70         80         90        100        110        120 
GANSLGGGGG EGDIVALKNY MNAQYFGEIG VGTPPQKFTV IFDTGSSNLW VPSAKCYFSI 

       130        140        150        160        170        180 
ACFFHSRYKS GQSSTYQKNG KPAAIQYGTG SIAGFFSEDS VTVGDLVVKD QEFIEATKEP 

       190        200        210        220        230        240 
GLTFMVAKFD GILGLGFQEI SVGDAVPVWY KMVEQGLVSE PVFSFWFNRH SDEGEGGEIV 

       250        260        270        280        290        300 
FGGMDPSHYK GNHTYVPVSQ KGYWQFEMGD VLIGGKTTGF CASGCSAIAD SGTSLLAGPT 

       310        320        330        340        350        360 
AIITEINEKI GATGVVSQEC KTVVSQYGQQ ILDLLLAETQ PSKICSQVGL CTFDGKHGVS 

       370        380        390        400        410        420 
AGIKSVVDDE AGESNGLQSG PMCNACEMAV VWMQNQLAQN KTQDLILNYI NQLCDKLPSP 

       430        440        450        460        470        480 
MGESSVDCGS LASMPEISFT IGGKKFALKP EEYILKVGEG AAAQCISGFT AMDIPPPRGP 

       490        500 
LWILGDVFMG AYHTVFDYGK MRVGFAKSA 

« Hide

References

« Hide 'large scale' references
[1]"Rice aspartic proteinase, oryzasin, expressed during seed ripening and germination, has a gene organization distinct from those of animal and microbial aspartic proteinases."
Asakura T., Watanabe H., Abe K., Arai S.
Eur. J. Biochem. 232:77-83(1995) [PubMed: 7556174] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA].
Strain: cv. Nipponbare.
Tissue: Seed.
[2]"A fine physical map of the rice chromosome 5."
Cheng C.-H., Chung M.C., Liu S.-M., Chen S.-K., Kao F.Y., Lin S.-J., Hsiao S.-H., Tseng I.C., Hsing Y.-I.C., Wu H.-P., Chen C.-S., Shaw J.-F., Wu J., Matsumoto T., Sasaki T., Chen H.-C., Chow T.-Y.
Mol. Genet. Genomics 274:337-345(2005) [PubMed: 16261349] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
D32144 mRNA. Translation: BAA06875.1.
D32165 Genomic DNA. Translation: BAA06876.1.
AC120986 Genomic DNA. Translation: AAU10663.1.
PIRS66516.
RefSeqNP_001056348.1. NM_001062883.1.
UniGeneOs.8298.

3D structure databases

ProteinModelPortalQ42456.
SMRQ42456. Positions 29-509.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ42456.

Protein family/group databases

MEROPSA01.020.

Proteomic databases

PRIDEQ42456.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsLOC_Os05g49200.1; LOC_Os05g49200.1; LOC_Os05g49200.
LOC_Os05g49200.2; LOC_Os05g49200.2; LOC_Os05g49200.
GeneID4339639.
KEGGosa:4339639.

Organism-specific databases

GrameneQ42456.

Phylogenomic databases

GeneTreeEPGT00070000028304.
OMAPSISVAN.
PhylomeDBQ42456.
ProtClustDBCLSN2919043.

Family and domain databases

InterProIPR001461. Peptidase_A1.
IPR021109. Peptidase_aspartic.
IPR001969. Peptidase_aspartic_AS.
IPR009007. Peptidase_aspartic_catalytic.
IPR007856. SapB_1.
IPR008138. SapB_2.
IPR011001. Saposin-like.
IPR008139. SaposinB.
[Graphical view]
Gene3DG3DSA:2.40.70.10. Pept_Aspartc_cat. 3 hits.
G3DSA:1.10.225.10. Saposin_like. 2 hits.
KOK08245.
PANTHERPTHR13683. Peptidase_A1. 1 hit.
PfamPF00026. Asp. 1 hit.
PF05184. SapB_1. 1 hit.
PF03489. SapB_2. 1 hit.
[Graphical view]
PRINTSPR00792. PEPSIN.
SMARTSM00741. SapB. 1 hit.
[Graphical view]
SUPFAMSSF50630. Pept_Aspartic. 1 hit.
SSF47862. Saposin_like. 1 hit.
PROSITEPS00141. ASP_PROTEASE. 2 hits.
PS50015. SAP_B. 2 hits.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameASPR1_ORYSJ
AccessionPrimary (citable) accession number: Q42456
Secondary accession number(s): Q688W6
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: October 25, 2005
Last modified: November 16, 2011
This is version 85 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

Peptidase families

Classification of peptidase families and list of entries

Oryza sativa (rice)

Index of Oryza sativa entries and their corresponding gene designations

SIMILARITY comments

Index of protein domains and families