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Protein

Zinc finger protein ZAT7

Gene

ZAT7

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

Probable transcription factor involved in oxidative stress response.1 Publication

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Zinc fingeri40 – 6223C2H2-type 1PROSITE-ProRule annotationAdd
BLAST
Zinc fingeri86 – 10823C2H2-type 2PROSITE-ProRule annotationAdd
BLAST

GO - Molecular functioni

  • metal ion binding Source: UniProtKB-KW
  • transcription factor activity, sequence-specific DNA binding Source: TAIR

GO - Biological processi

  • negative regulation of growth Source: UniProtKB
  • regulation of response to stress Source: UniProtKB
  • regulation of transcription, DNA-templated Source: TAIR
  • response to chitin Source: TAIR
  • transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

Metal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
Zinc finger protein ZAT7
Gene namesi
Name:ZAT7
Ordered Locus Names:At3g46090
ORF Names:F12M12.60
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 3

Organism-specific databases

TAIRiAT3G46090.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 168168Zinc finger protein ZAT7PRO_0000409716Add
BLAST

Proteomic databases

PaxDbiQ42453.

Expressioni

Tissue specificityi

Expressed in roots, stems and leaves.1 Publication

Inductioni

By H2O2, heat stress, wounding and cucumber mosaic virus (CMV).2 Publications

Interactioni

Protein-protein interaction databases

IntActiQ42453. 44 interactions.
STRINGi3702.AT3G46090.1.

Structurei

3D structure databases

ProteinModelPortaliQ42453.
SMRiQ42453. Positions 31-71, 76-115.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains 2 C2H2-type zinc fingers.PROSITE-ProRule annotation

Zinc finger

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Zinc fingeri40 – 6223C2H2-type 1PROSITE-ProRule annotationAdd
BLAST
Zinc fingeri86 – 10823C2H2-type 2PROSITE-ProRule annotationAdd
BLAST

Keywords - Domaini

Repeat, Zinc-finger

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.
HOGENOMiHOG000238452.
InParanoidiQ42453.
OMAiLGRTISW.
PhylomeDBiQ42453.

Family and domain databases

InterProiIPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
[Graphical view]
PfamiPF13912. zf-C2H2_6. 2 hits.
[Graphical view]
SMARTiSM00355. ZnF_C2H2. 2 hits.
[Graphical view]
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 2 hits.
PS50157. ZINC_FINGER_C2H2_2. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q42453-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVARSEEIVI VEEDTTAKCL MLLSRVGECG GGCGGDERVF RCKTCLKEFS
60 70 80 90 100
SFQALGGHRA SHKKLINSDN PSLLGSLSNK KTKTSHPCPI CGVKFPMGQA
110 120 130 140 150
LGGHMRRHRN EKVSGSLVTR SFLPETTTVT ALKKFSSGKR VACLDLDLDS
160
MESLVNWKLE LGRTISWS
Length:168
Mass (Da):18,359
Last modified:November 1, 1996 - v1
Checksum:i2CF7DD7ACCE86988
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X98676 mRNA. Translation: CAA67234.1.
X98677 Genomic DNA. Translation: CAA67235.1.
AL355775 Genomic DNA. Translation: CAB90936.1.
CP002686 Genomic DNA. Translation: AEE78112.1.
BT024870 mRNA. Translation: ABD65601.1.
AB493641 mRNA. Translation: BAH30479.1.
PIRiT49250.
RefSeqiNP_190195.1. NM_114478.3.
UniGeneiAt.19763.

Genome annotation databases

EnsemblPlantsiAT3G46090.1; AT3G46090.1; AT3G46090.
GeneIDi823752.
GrameneiAT3G46090.1; AT3G46090.1; AT3G46090.
KEGGiath:AT3G46090.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X98676 mRNA. Translation: CAA67234.1.
X98677 Genomic DNA. Translation: CAA67235.1.
AL355775 Genomic DNA. Translation: CAB90936.1.
CP002686 Genomic DNA. Translation: AEE78112.1.
BT024870 mRNA. Translation: ABD65601.1.
AB493641 mRNA. Translation: BAH30479.1.
PIRiT49250.
RefSeqiNP_190195.1. NM_114478.3.
UniGeneiAt.19763.

3D structure databases

ProteinModelPortaliQ42453.
SMRiQ42453. Positions 31-71, 76-115.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ42453. 44 interactions.
STRINGi3702.AT3G46090.1.

Proteomic databases

PaxDbiQ42453.

Protocols and materials databases

DNASUi823752.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT3G46090.1; AT3G46090.1; AT3G46090.
GeneIDi823752.
GrameneiAT3G46090.1; AT3G46090.1; AT3G46090.
KEGGiath:AT3G46090.

Organism-specific databases

TAIRiAT3G46090.

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.
HOGENOMiHOG000238452.
InParanoidiQ42453.
OMAiLGRTISW.
PhylomeDBiQ42453.

Miscellaneous databases

PROiQ42453.

Family and domain databases

InterProiIPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
[Graphical view]
PfamiPF13912. zf-C2H2_6. 2 hits.
[Graphical view]
SMARTiSM00355. ZnF_C2H2. 2 hits.
[Graphical view]
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 2 hits.
PS50157. ZINC_FINGER_C2H2_2. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Isolation and characterisation of a diverse family of Arabidopsis two and three-fingered protein genes and cDNA's."
    Meissner R., Michael A.J.
    Plant Mol. Biol. 33:615-624(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA], TISSUE SPECIFICITY.
    Strain: cv. Columbia.
  2. "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana."
    Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B., Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M., Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V., Choisne N., Artiguenave F.
    , Robert C., Brottier P., Wincker P., Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H., Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H., Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A., Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H., Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J., Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B., Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D., de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E., Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G., Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X., Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M., Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B., Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J., Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C., Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y., Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K., Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
    Nature 408:820-822(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  3. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  4. "Arabidopsis ORF clones."
    Kim C.J., Chen H., Shinn P., Ecker J.R.
    Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Columbia.
  5. "ORF cloning and analysis of Arabidopsis transcription factor genes."
    Fujita M., Mizukado S., Seki M., Shinozaki K., Mitsuda N., Takiguchi Y., Takagi M.
    Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
  6. "The zinc finger protein Zat12 is required for cytosolic ascorbate peroxidase 1 expression during oxidative stress in Arabidopsis."
    Rizhsky L., Davletova S., Liang H., Mittler R.
    J. Biol. Chem. 279:11736-11743(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: FUNCTION, INDUCTION.
  7. "Spermine signaling plays a significant role in the defense response of Arabidopsis thaliana to cucumber mosaic virus."
    Mitsuya Y., Takahashi Y., Berberich T., Miyazaki A., Matsumura H., Takahashi H., Terauchi R., Kusano T.
    J. Plant Physiol. 166:626-643(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: INDUCTION BY CUCUMBER MOSAIC VIRUS.

Entry informationi

Entry nameiZAT7_ARATH
AccessioniPrimary (citable) accession number: Q42453
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 28, 2011
Last sequence update: November 1, 1996
Last modified: February 17, 2016
This is version 124 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Miscellaneous

Plants overexpressing ZAT7 show retarded growth and development, and enhanced tolerance to oxidative stress.

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.