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Protein
Submitted name:

Chitinase Ib

Gene
N/A
Organism
Castanea sativa (Sweet chestnut)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

Chitin-bindingUniRule annotationSAAS annotation

Protein family/group databases

CAZyiCBM18. Carbohydrate-Binding Module Family 18.
GH19. Glycoside Hydrolase Family 19.

Names & Taxonomyi

Protein namesi
Submitted name:
Chitinase IbImported
Submitted name:
EndochitinaseImported
OrganismiCastanea sativa (Sweet chestnut)Imported
Taxonomic identifieri21020 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsFagalesFagaceaeCastanea

Pathology & Biotechi

Protein family/group databases

Allergomei193. Cas s 5.
3179. Cas s 5.0101.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1818Sequence analysisAdd
BLAST
Chaini19 – 316298Sequence analysisPRO_5004231937Add
BLAST

Keywords - PTMi

Disulfide bondSAAS annotation

Structurei

3D structure databases

ProteinModelPortaliQ42428.
SMRiQ42428. Positions 19-315.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini18 – 5942Chitin-binding type-1InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the glycosyl hydrolase 19 family.SAAS annotation
Contains 1 chitin-binding type-1 domain.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Family and domain databases

Gene3Di3.30.60.10. 1 hit.
InterProiIPR001002. Chitin-bd_1.
IPR018371. Chitin-binding_1_CS.
IPR016283. Glyco_hydro_19.
IPR000726. Glyco_hydro_19_cat.
IPR023346. Lysozyme-like_dom.
[Graphical view]
PfamiPF00187. Chitin_bind_1. 1 hit.
PF00182. Glyco_hydro_19. 1 hit.
[Graphical view]
PIRSFiPIRSF001060. Endochitinase. 1 hit.
PRINTSiPR00451. CHITINBINDNG.
SMARTiSM00270. ChtBD1. 1 hit.
[Graphical view]
SUPFAMiSSF53955. SSF53955. 1 hit.
SSF57016. SSF57016. 1 hit.
PROSITEiPS00026. CHIT_BIND_I_1. 1 hit.
PS50941. CHIT_BIND_I_2. 1 hit.
PS00773. CHITINASE_19_1. 1 hit.
PS00774. CHITINASE_19_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q42428-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKLFSLLLFL AFLLGTSAEQ CGRQAGGAAC ANNLCCSQFG WCGNTAEYCG
60 70 80 90 100
AGCQSQCSSP TTTTSSPTAS SGGGGDVGSL ISASLFDQML KYRNDPRCKS
110 120 130 140 150
NGFYTYNAFI AAARSFNGFG TTGDVTTRKR ELAAFLAQTS HETTGGWATA
160 170 180 190 200
PDGPYAWGYC FVMENNKQTY CTSKSWPCVF GKQYYGRGPI QLTHNYNYGQ
210 220 230 240 250
AGKAIGADLI NNPDLVATNP TISFKTAIWF WMTPQANKPS SHDVIIGNWR
260 270 280 290 300
PSAADTSAGR VPSYGVITNI INGGLECGHG SDDRVANRIG FYKRYCDTLG
310
VSYGNNLDCY NQKPFA
Length:316
Mass (Da):33,946
Last modified:November 1, 1996 - v1
Checksum:i11FFBF24FEB875A2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U48687 mRNA. Translation: AAB01895.1.
X95610 mRNA. Translation: CAA64868.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U48687 mRNA. Translation: AAB01895.1.
X95610 mRNA. Translation: CAA64868.1.

3D structure databases

ProteinModelPortaliQ42428.
SMRiQ42428. Positions 19-315.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

Allergomei193. Cas s 5.
3179. Cas s 5.0101.
CAZyiCBM18. Carbohydrate-Binding Module Family 18.
GH19. Glycoside Hydrolase Family 19.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di3.30.60.10. 1 hit.
InterProiIPR001002. Chitin-bd_1.
IPR018371. Chitin-binding_1_CS.
IPR016283. Glyco_hydro_19.
IPR000726. Glyco_hydro_19_cat.
IPR023346. Lysozyme-like_dom.
[Graphical view]
PfamiPF00187. Chitin_bind_1. 1 hit.
PF00182. Glyco_hydro_19. 1 hit.
[Graphical view]
PIRSFiPIRSF001060. Endochitinase. 1 hit.
PRINTSiPR00451. CHITINBINDNG.
SMARTiSM00270. ChtBD1. 1 hit.
[Graphical view]
SUPFAMiSSF53955. SSF53955. 1 hit.
SSF57016. SSF57016. 1 hit.
PROSITEiPS00026. CHIT_BIND_I_1. 1 hit.
PS50941. CHIT_BIND_I_2. 1 hit.
PS00773. CHITINASE_19_1. 1 hit.
PS00774. CHITINASE_19_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Bacterial expression of an active class Ib chitinase from Castanea sativa cotyledons."
    Allona I., Collada C., Casado R., Paz-Ares J., Aragoncillo C.
    Submitted (FEB-1996) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: CotyledonsImported.
  2. Allona I., Collada C., Casado R., Paz-Ares J., Aragoncillo C.
    Submitted (FEB-1996) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: CotyledonImported.

Entry informationi

Entry nameiQ42428_CASSA
AccessioniPrimary (citable) accession number: Q42428
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: May 11, 2016
This is version 83 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.