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Protein
Submitted name:

RNA-binding protein RZ-1

Gene

LOC104235736

Organism
Nicotiana sylvestris (Wood tobacco) (South American tobacco)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
RNA-binding protein RZ-1Imported
Submitted name:
glycine-rich RNA-binding protein-likeImported
Gene namesi
Name:LOC104235736Imported
OrganismiNicotiana sylvestris (Wood tobacco) (South American tobacco)Imported
Taxonomic identifieri4096 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeNicotianoideaeNicotianeaeNicotiana
Proteomesi
  • UP000189701 Componenti: Genome assembly

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini6 – 84RRMInterPro annotationAdd BLAST79
Domaini129 – 144CCHC-typeInterPro annotationAdd BLAST16

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

KOiK12885

Family and domain databases

Gene3Di3.30.70.3301 hit
InterProiView protein in InterPro
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
IPR001878 Znf_CCHC
IPR036875 Znf_CCHC_sf
PfamiView protein in Pfam
PF00076 RRM_1, 1 hit
PF00098 zf-CCHC, 1 hit
SMARTiView protein in SMART
SM00360 RRM, 1 hit
SM00343 ZnF_C2HC, 1 hit
SUPFAMiSSF54928 SSF54928, 1 hit
SSF57756 SSF57756, 1 hit
PROSITEiView protein in PROSITE
PS50102 RRM, 1 hit
PS50158 ZF_CCHC, 1 hit

Sequencei

Sequence statusi: Complete.

Q42412-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADDEYRCFI GNLSWSTSDR GLKDAFEKFG NLVDAKVVLD KFSGRSRGFG
60 70 80 90 100
FVTFDEKRAM EDAIEAMNGV DLDGRDITVD KAQPDKGSGR DFDSDRPRDR
110 120 130 140 150
DRDRGRDRDR DRGSRDYGGG RGSGGGGDCF NCGKPGHFAR ECPSEGGRGG
160 170 180 190 200
RYGGGGGGSR SSGYGPDRNG DRYGSRSGRD GGGRGGGERF SRDRSGPYER

RSSGGSRAG
Length:209
Mass (Da):22,457
Last modified:November 1, 1996 - v1
Checksum:i72BBF5EA263569F5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D28861 mRNA Translation: BAA06012.1
D83696 Genomic DNA Translation: BAA12064.1
PIRiJC4817
RefSeqiNP_001289534.1, NM_001302605.1
XP_009787847.1, XM_009789545.1
XP_009787848.1, XM_009789546.1
XP_009787849.1, XM_009789547.1

Genome annotation databases

GeneIDi104235736
KEGGinsy:104235736

Similar proteinsi

Entry informationi

Entry nameiQ42412_NICSY
AccessioniPrimary (citable) accession number: Q42412
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: February 28, 2018
This is version 85 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported